Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0058 ATGGGACTTGGTTTCTTCAAGGCGCTTTGCTGTAGCAATGATCATCATGAAATTCGCATAGACTCGTCGGACTCCTCTCCCGTGCGGCCTCCCAGGCAGAGGTCCAGGGAACATGAGTACGACATCGTCAAACCAGTACCTGCTTCGAATTCTAAGCCTAAACAAGCGGCTGCGCATTCGCAAGCACTAGTAGGGCCGGTGCTGGGCAAACCGTACGTGGACATAAGTATGATGTACAAGCTGGAGAAAGAGCTGGGTAGAGGGCAATCGGGGGTGACATATCTGTGCACAGAGAAGACGACGGGGAGAAAGTACGCGTGCAAGAGCATAGCGAGGAGGAAGCTGACGAGGAAGGAGGAAATAGAGGACGTGCGTAGAGAGATACTGATACTGCAGCATCTGTCGGGGCAGCCAAACATTGTGGAATTCAGGGGCGCATACGAGGACCGGCAGAACGTGTACCTCGTCATGGAACTGTGCACCGGAGGCGAGCTGTTTGACCGCATCATCGCCAAAGGGAACTATTCGGAGAAGGAAGCAGCGGCGCTGTTCCGGCAGATCGTGACGGTAGTTCATGTGTGCCATTTCATGGGAGTCATGCATCGGGACCTGAAGCCTGAGAATTTCTTGATGGCCAGCGAGCACGATCACGCCCCCATCAAAGCCACCGATTTTGGACTCTCCGTCTTCATTGAGCCCGGTCGGTCCCCTCTCTTCTACCCTTTCTCTTTCATTCTTCTTCACTTTCATATATACTTAATTGAAGGGAATGATGCTGAGGAGGACCAGGGCGGGGAGGGGTACAAAGCAGGGCATCCCCTGAAAGGAGCAGAGGATCACAGCACTCTCTTCTCATCAGGATGCTCCTCCATTCCCAACTTCTTGTTCACTCTCTGCAATAAAAACCAAAGAATGGGGTTATGCTTCAGCAAATCCTCCTCTGATTCGCCAGCCCATCGTCACTACCAGCAGCTTCCGAAGAGAAATCCTCCCCCACACCCCGCCCCCTCTTCCTCTTCTTCCTCCCACCCTCAAGTCGGTCCCGTTTTGGGCAAACCATATTTTGACATGAAAACGCTCTACTCTTTGGACAGAGAATTGGGGAGAGGCCAATTCGGCATCACTTATCTCTGCACCGAGAAGCTCACCGGACTTAGGTACGCCTGTAAGTCCATATCAAGGAGAAAGCTGACCAGCCGCAAGGGAATCGACGACGTGAAGAAGGAAATTGTGATCCTGCAGCACCTCACGGGGCAGCCCAACATTGTGGAATTCAAGGGAGCTTACGAGGACTGGCATCACGTGCATTTGGTCATGGAGTTGTGTTCCGGTGGGGAGCTTTTTGATCGGATTATTGCGAAAGGGGTTTACTCGGAGGACGAAGCTGCCGTCATATTCAGGCAAGTTGTGAACGTGGTTCACGTTTGTCATTTCATGGGCGTGATGCATAGGGACCTTAAGCCCGAGAATTTCTTGTTGGCCACCAGGGACCCCAATTCTCCCTTGAAAGCCATGGATTTTGGCCTCTCTGTCTTCATTGAGCCAGGTAAAGAGTATAAGGAAGTTGTGGGAAGTGCGTATTATGTGGCCCCGGAGGTTCTAAAACGGAGTTATGGAAAGGAGATTGATGTGTGGAGTGCAGGAGTCATTTTATGCATCCTCCTTAGTGGGGTGCCTCCATTTTGGGCTGAGAACGAGAAAGGCATATTTGATGCTATTCTGGAAGGCAAACTGGAACTTGAAAGCGAACCGTGGCCTTCTATTTCAGCTTCTGCCAAGGATCTGATCAGGAAAATGTTGACATATGATCCCAAGAAACGCATCACAGCTGCTGATGCCCTTGAACATCCATGGATGAAGGTGGGTGGTCAAGCGTCTGACAAGCCTATAGACAGTGCCGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAATAAAATGAAGAAACTTGCCCTAAAGGTAATAGCAGAAAACCTGTCAGAGGAAGAAATCAAGGGCTTGAAACAGATGTTCAACAATATGGATACAGATAACAGTGGCACGATCACACTTGAAGAACTCAGAGCTGGATTGACCAAATTGGGGTCTAAACTTAACGAATCTGAAATACGGCAGCTGATGGATGCTGCTGATGTTGACAATAATGGAACTATTGATTATTATGAATTCATAACTGCCACCATGCATCGGCATAGACTTGAGAAGGAAGAGAACTTGTTCAAGGCTTTCCAATACTTCGACAAGGATAACAGCGGATTCATCACAAGAGAGGAGCTCAGGCAGGCTTTGACTGAATATGGAATGGGGGATGAAGCTACAATAGATGAAGTGATTGACGATGTGGACACTGATAAAGATGGCAGAATCAATTACGAAGAGTTTGTGGCTATGATGAAGAGCGCGGGATGA 2409 0.4915 MGLGFFKALCCSNDHHEIRIDSSDSSPVRPPRQRSREHEYDIVKPVPASNSKPKQAAAHSQALVGPVLGKPYVDISMMYKLEKELGRGQSGVTYLCTEKTTGRKYACKSIARRKLTRKEEIEDVRREILILQHLSGQPNIVEFRGAYEDRQNVYLVMELCTGGELFDRIIAKGNYSEKEAAALFRQIVTVVHVCHFMGVMHRDLKPENFLMASEHDHAPIKATDFGLSVFIEPGRSPLFYPFSFILLHFHIYLIEGNDAEEDQGGEGYKAGHPLKGAEDHSTLFSSGCSSIPNFLFTLCNKNQRMGLCFSKSSSDSPAHRHYQQLPKRNPPPHPAPSSSSSSHPQVGPVLGKPYFDMKTLYSLDRELGRGQFGITYLCTEKLTGLRYACKSISRRKLTSRKGIDDVKKEIVILQHLTGQPNIVEFKGAYEDWHHVHLVMELCSGGELFDRIIAKGVYSEDEAAVIFRQVVNVVHVCHFMGVMHRDLKPENFLLATRDPNSPLKAMDFGLSVFIEPGKEYKEVVGSAYYVAPEVLKRSYGKEIDVWSAGVILCILLSGVPPFWAENEKGIFDAILEGKLELESEPWPSISASAKDLIRKMLTYDPKKRITAADALEHPWMKVGGQASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDNSGTITLEELRAGLTKLGSKLNESEIRQLMDAADVDNNGTIDYYEFITATMHRHRLEKEENLFKAFQYFDKDNSGFITREELRQALTEYGMGDEATIDEVIDDVDTDKDGRINYEEFVAMMKSAG 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0058 802 SMART efh_1 666 694 IPR002048 GO:0005509
Lele26g0058 802 SMART efh_1 702 730 IPR002048 GO:0005509
Lele26g0058 802 SMART efh_1 738 766 IPR002048 GO:0005509
Lele26g0058 802 SMART efh_1 773 801 IPR002048 GO:0005509
Lele26g0058 802 Gene3D Phosphorylase Kinase; domain 1 363 446 - -
Lele26g0058 802 Gene3D Phosphorylase Kinase; domain 1 81 165 - -
Lele26g0058 802 Pfam EF-hand domain pair 667 727 IPR002048 GO:0005509
Lele26g0058 802 Pfam EF-hand domain pair 736 799 IPR002048 GO:0005509
Lele26g0058 802 Gene3D - 626 801 - -
Lele26g0058 802 ProSiteProfiles EF-hand calcium-binding domain profile. 662 697 IPR002048 GO:0005509
Lele26g0058 802 Gene3D Transferase(Phosphotransferase) domain 1 166 249 - -
Lele26g0058 802 SUPERFAMILY Protein kinase-like (PK-like) 79 235 IPR011009 -
Lele26g0058 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Lele26g0058 802 FunFam Calcium-dependent protein kinase 1 363 446 - -
Lele26g0058 802 SUPERFAMILY Protein kinase-like (PK-like) 361 620 IPR011009 -
Lele26g0058 802 ProSitePatterns EF-hand calcium-binding domain. 711 723 IPR018247 -
Lele26g0058 802 FunFam Calcium-dependent protein kinase 1 627 802 - -
Lele26g0058 802 FunFam Calcium-dependent protein kinase 1 81 164 - -
Lele26g0058 802 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Lele26g0058 802 Pfam Protein kinase domain 361 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0058 802 Pfam Protein kinase domain 79 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0058 802 MobiDBLite consensus disorder prediction 20 60 - -
Lele26g0058 802 MobiDBLite consensus disorder prediction 311 346 - -
Lele26g0058 802 ProSitePatterns EF-hand calcium-binding domain. 747 759 IPR018247 -
Lele26g0058 802 SMART serkin_6 361 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0058 802 SMART serkin_6 79 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0058 802 SUPERFAMILY EF-hand 658 798 IPR011992 -
Lele26g0058 802 ProSitePatterns EF-hand calcium-binding domain. 675 687 IPR018247 -
Lele26g0058 802 PANTHER SERINE/THREONINE-PROTEIN KINASE 356 794 - -
Lele26g0058 802 ProSiteProfiles EF-hand calcium-binding domain profile. 770 802 IPR002048 GO:0005509
Lele26g0058 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lele26g0058 802 Gene3D Transferase(Phosphotransferase) domain 1 447 625 - -
Lele26g0058 802 FunFam calcium-dependent protein kinase 1 447 626 - -
Lele26g0058 802 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Lele26g0058 802 ProSiteProfiles EF-hand calcium-binding domain profile. 698 733 IPR002048 GO:0005509
Lele26g0058 802 CDD STKc_CAMK 361 618 - -
Lele26g0058 802 ProSiteProfiles Protein kinase domain profile. 361 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0058 802 ProSiteProfiles EF-hand calcium-binding domain profile. 734 769 IPR002048 GO:0005509
Lele26g0058 802 ProSiteProfiles Protein kinase domain profile. 79 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0058 802 ProSitePatterns EF-hand calcium-binding domain. 782 794 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0058 Lele-ChrLele26 317745 322208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0058 335 801 EF-hand Containing Proteins AT3G20410 70.664 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele26g0058 Pkinase 1.1e-71 CL0016