Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0053 ATGGTTCGATCTGCTTCTGGTGTGAATTCTAGTGATTCTCTTCATTCAAACTCACAAAGAAAAGCCAGTCATCAAGATTCTCATATTACAGGCAACATGAGGCATGGTTATTTGAATATATTTACTAAAAACATTCATCCTGCTCCGGCCTTTGGTTCCTCAGCTAACTTTGAACTTGCTCTTGAAGCAAGCCAGTTAAAAGTTCAATCTAATAGTGGCAATTCGAAATTCTATACACAATATTCCCGACCAATGCATGAGATCACGATATCAACAAATGACAAGCCAAAACTTCTCAGTCAGTTGACTTACCTGCTGTCCGAAACTGGGTTGAATATCCAAGAAGCACATGCTTTTTCAACATTGGATGGTTATTCATTGGATGTTTTTGTTGTTGGTGGTTGGCCTGTTGAGGAGACTGAGAAGCTTAAACATGTGCTGACAAAAAAAATTCAGAAACTTGAGCAGCGGCCGTCCTTCAAGAAAATTGGCAGTCAAACTGCAGAGCAAGAACAAATCAAGATCAATTTTATCTCTAATAATGGGAATCTACCTTTATGGGGAAGCGTCTCCTGGGAAATCGATGCAAGCTGTTTGAAATATGAAAGGAAAATTGCATCTGGACCTTTCTTTGATTTGTATAAAGGTGTTTTCTGTAACCAACAAGTAGCTATCAAAGTTCTTAAGACTGAGAATCTCAATGAAAATATACAAAGAGAGTTTGCTCAAGAGGTGTATATTCTGAGTAAATTGTGTCACAAGAATGTTGTGAAATTTGTGGGGGCTAGTACAAAACCTCCAGGCCTATTCATTGTTACAGAATACATGTTTGGTGGGAGTATGTATGAGTTTTTGCATACACAGAAGGCTGTGCTTAGTCTCCCATGTTTGCTCAGAGTAGCAATCAATGTTTGTGAAGGAATGAACTATTTGCATCAGAATGACATCATACACAGGGACCTCAAAACCGGGAATCTTTTGATGGATGAGAATGGGTTGGTGAAGGTAGCAGATTTTGGTGTAGCAAGGGTGGAAGATCAGTCAGGCATCATGACTGCAGAAACTGGAACTTATAGATGGATGGCTCCAGAGGTTATTGAACACAAACCATATAATCACAAAGCCGATGTGTTCAGCTTTGGAATTACTCTGTGGGAGCTGCTGACGGGGAAGCTTCCGTATGAGCATTTGTCACCATTGCAAGCAGCAGTTGGAGTGGTCCACAAGGGGTCGAGACCCAAAGTTCCGAGGCATACACATCCAATGTTAGTAGAGATGATGAACCGTTGCTGGCACCAAGACCCTTCTTTCAGACCCGAATTCTCAGAAATTCTGGAATTTCTGCGCCATTTTTCCCGGAATGGGTGCCCGATACACGACAAGACCCTAAGGCCACGTTTGGTACGTAGACCCTTTAATAAGCCTTCAAGAGTGAGACCCAACCAACCAGACCCTTTAAGCGTGTCCAGGGATCGGATAAAGCCAGAGGATCAGGTTCTGCTTCCCTTTTATGGTGGAAAATTTTCTCAAGCGAAAGGAAGAAGCAGGACTCATAGCAAAGGGCCTAGGCATTCTGCTTCCAAGTTAGAGATGGCGACGCCGGTGAAAGTGTACGGACCAACATTGTCCACGGCCGTGTCTAGGGTTTTGGCGTGTCTCGTCGAGAAGGACGTCCAATTCCAGCTTGTTCCTGTTAACATGTCCAAAGGGGAGCATAAGAAGCCCGATTTCCTCAAGATTCATCCCTTTGGTCAAGTACCAGCATTCGAGGATGAGAGCATTTCCCTCTTCGAGTCGAGAGCGATATGCCGATACATTTGCGAGAAGCATCCGGCGAGGGGGAACAAAGCACTGTACGGCTCGAACCCGTTGGCGAAGGCGTCCATAGATCAGTGGTTAGAGGCGGAGGGGCAGAGTTTCAACCCGCCCACCTCAGTTCTGGTGTTTCAGCTCGCATTTGCTCCTCGAATGAAGATCAAACAAGACGAGGGAGCCATCGGTCTCAACGGAGAGAAACTAGCCAAAGTGCTGGATGTGTACGATAAGAGGCTTGGGGAGAGTCGTTTCTTGGCGGGCGATGAATTTTCTCTGGCGGACCTCTCTCACCTTCCCAACACACAATACTTGATGGGCACCGAGAAAGGCGAGCTGTTCACTTGCAGGAAGAATGTGTCCAGGTGGTGGTCAGAGATTTCCACTCGAGATTCCTGGAAGCAGGTGGTCGATATGCAGAGCACTAAAAGTTGA 2247 0.4513 MVRSASGVNSSDSLHSNSQRKASHQDSHITGNMRHGYLNIFTKNIHPAPAFGSSANFELALEASQLKVQSNSGNSKFYTQYSRPMHEITISTNDKPKLLSQLTYLLSETGLNIQEAHAFSTLDGYSLDVFVVGGWPVEETEKLKHVLTKKIQKLEQRPSFKKIGSQTAEQEQIKINFISNNGNLPLWGSVSWEIDASCLKYERKIASGPFFDLYKGVFCNQQVAIKVLKTENLNENIQREFAQEVYILSKLCHKNVVKFVGASTKPPGLFIVTEYMFGGSMYEFLHTQKAVLSLPCLLRVAINVCEGMNYLHQNDIIHRDLKTGNLLMDENGLVKVADFGVARVEDQSGIMTAETGTYRWMAPEVIEHKPYNHKADVFSFGITLWELLTGKLPYEHLSPLQAAVGVVHKGSRPKVPRHTHPMLVEMMNRCWHQDPSFRPEFSEILEFLRHFSRNGCPIHDKTLRPRLVRRPFNKPSRVRPNQPDPLSVSRDRIKPEDQVLLPFYGGKFSQAKGRSRTHSKGPRHSASKLEMATPVKVYGPTLSTAVSRVLACLVEKDVQFQLVPVNMSKGEHKKPDFLKIHPFGQVPAFEDESISLFESRAICRYICEKHPARGNKALYGSNPLAKASIDQWLEAEGQSFNPPTSVLVFQLAFAPRMKIKQDEGAIGLNGEKLAKVLDVYDKRLGESRFLAGDEFSLADLSHLPNTQYLMGTEKGELFTCRKNVSRWWSEISTRDSWKQVVDMQSTKS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0053 748 SFLD Glutathione Transferase (cytosolic) 534 744 IPR040079 -
Lele26g0053 748 MobiDBLite consensus disorder prediction 1 30 - -
Lele26g0053 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Lele26g0053 748 SUPERFAMILY Thioredoxin-like 534 613 IPR036249 -
Lele26g0053 748 Gene3D Glutaredoxin 532 620 - -
Lele26g0053 748 SUPERFAMILY Protein kinase-like (PK-like) 181 448 IPR011009 -
Lele26g0053 748 SFLD Main.5: Phi-like 534 744 - -
Lele26g0053 748 SUPERFAMILY GST C-terminal domain-like 615 742 IPR036282 -
Lele26g0053 748 FunFam Glutathione S-transferase F2 620 741 - -
Lele26g0053 748 Gene3D Transferase(Phosphotransferase) domain 1 278 464 - -
Lele26g0053 748 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 622 748 IPR010987 -
Lele26g0053 748 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 533 614 IPR004045 -
Lele26g0053 748 Pfam Glutathione S-transferase, C-terminal domain 667 735 IPR004046 -
Lele26g0053 748 Pfam Protein tyrosine and serine/threonine kinase 199 448 IPR001245 GO:0004672|GO:0006468
Lele26g0053 748 CDD GST_C_Phi 624 741 IPR034347 -
Lele26g0053 748 FunFam Kinase suppressor of Ras 1 189 276 - -
Lele26g0053 748 Coils Coil 137 157 - -
Lele26g0053 748 FunFam Glutathione S-transferase F2 534 618 - -
Lele26g0053 748 Gene3D Phosphorylase Kinase; domain 1 188 276 - -
Lele26g0053 748 CDD STKc_MAP3K-like 205 448 - -
Lele26g0053 748 SUPERFAMILY ACT-like 85 158 IPR045865 -
Lele26g0053 748 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 451 - -
Lele26g0053 748 Pfam Glutathione S-transferase, N-terminal domain 534 606 IPR004045 -
Lele26g0053 748 MobiDBLite consensus disorder prediction 470 489 - -
Lele26g0053 748 Gene3D - 621 741 - -
Lele26g0053 748 SMART serkin_6 199 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0053 748 CDD GST_N_Phi 534 609 - -
Lele26g0053 748 ProSiteProfiles Protein kinase domain profile. 199 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0053 748 PRINTS Tyrosine kinase catalytic domain signature 375 397 IPR001245 GO:0004672|GO:0006468
Lele26g0053 748 PRINTS Tyrosine kinase catalytic domain signature 356 366 IPR001245 GO:0004672|GO:0006468
Lele26g0053 748 PRINTS Tyrosine kinase catalytic domain signature 273 286 IPR001245 GO:0004672|GO:0006468
Lele26g0053 748 PRINTS Tyrosine kinase catalytic domain signature 419 441 IPR001245 GO:0004672|GO:0006468
Lele26g0053 748 PRINTS Tyrosine kinase catalytic domain signature 310 328 IPR001245 GO:0004672|GO:0006468
Lele26g0053 748 ProSiteProfiles ACT domain profile. 87 168 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0053 Lele-ChrLele26 296749 303357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0053 49 453 MAP Kinase Kinase Kinase AT4G35780 58.272 5.63e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele26g0053 PK_Tyr_Ser-Thr 3.1e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0053 26 296749 303357 Lele28g0052 28 294450 301787 hybridization