Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0052 ATGTGCCTGGTGAACAAGATCCTTACTACAAGAAAAGCAGAGATTAGCGTTTTTGAGAAGGACACAAATGACTTGTCAGTGTTGGACTTGCCAGACCTGGTCTTGGAATGCATTATTGAAAGGCTGTCTCCTCCGGCGCTTTGTAAAATGGCAGGTGTTTGCCGTTCCATGAGGGAGAGATGTGTGAGTGATTATTTCTGGGAAAGGCACACGAAACAGAAATGGGGTAGAGTTATTGGTCCAGCTGCTTACAGGCAGTGGCAATGTCATATTGCTTCAAAACACGATGATGTTGCCACTCTTAGAAAAGACAAAGGAAGGGGGTTATTGAGGTTTCTTCCCTTTAGTCTGTTGCCTTTTCCATGGATTAGACTATTGAAGGTTGCTTCAAACGATAGCTGCAGCAAGCAGCAGAGTTCTTTGCCTACTCATTCAGTCATGACATGTGCCTTACCTGTTGATACTCCTCCACGAGATCTTCATATTTCTAATTGTTTGAATGATTTGTGTCCGGATAAACTATTTGGATATAAGGCCACCTTTGAAGCATATATTGGAGTCCGGGATGATCAAGCTACAGCTCAACTGAAACTCTTTGGTGACAATTTGCAAGTTCTGGAGCAAAATCTCCCAATGGATAGTGTATACAAATCAGAACATGTAAATGCTGCACCTATCCGTGTTATCCAGCTTATATGTAATGCTGAGGATGTTGGAGGACCACAGATTGTTGCTTTTAATCTACCAAATGATGAGCGTATAGTAAATGATCGAGGAACATCAATGGTCATGCTTAAGAATGTTTCGGAGGCAAAATTTAAGCATATTCTTCTGCACATTGCTGAAGTCTGTGTTGCAAAGGAACAACAAGAACTTGTAGATTTTGAATCATTTTTTACTCATACAATTTGCCACGAATGCTGCCATGGGATCGGACCTCATACCATAATACTTCCAAATGGTCAGAAGTCTACAGTGAGATTGGAATTGAAAGAATTCCACTCTGCTTTGGAAGAAGCAAAAGCTTCACTTCATCAGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAGAGCTCCATATCCGACAAACAATGCCAAGAAGCCAGTTGAAGCCAAGGATGGGCTTGTCTCCTAA 1137 0.4169 MCLVNKILTTRKAEISVFEKDTNDLSVLDLPDLVLECIIERLSPPALCKMAGVCRSMRERCVSDYFWERHTKQKWGRVIGPAAYRQWQCHIASKHDDVATLRKDKGRGLLRFLPFSLLPFPWIRLLKVASNDSCSKQQSSLPTHSVMTCALPVDTPPRDLHISNCLNDLCPDKLFGYKATFEAYIGVRDDQATAQLKLFGDNLQVLEQNLPMDSVYKSEHVNAAPIRVIQLICNAEDVGGPQIVAFNLPNDERIVNDRGTSMVMLKNVSEAKFKHILLHIAEVCVAKEQQELVDFESFFTHTICHECCHGIGPHTIILPNGQKSTVRLELKEFHSALEEAKASLHQFLEKRKDRIAARAPYPTNNAKKPVEAKDGLVS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0052 378 Pfam F-box domain 28 68 IPR001810 GO:0005515
Lele26g0052 378 MobiDBLite consensus disorder prediction 358 378 - -
Lele26g0052 378 SMART fbox_2 30 70 IPR001810 GO:0005515
Lele26g0052 378 ProSiteProfiles F-box domain profile. 24 70 IPR001810 GO:0005515
Lele26g0052 378 Gene3D - 15 100 - -
Lele26g0052 378 Pfam Jas motif 341 361 IPR018467 -
Lele26g0052 378 PANTHER DIPEPTIDYL PEPTIDASE III-RELATED 172 343 IPR039461 -
Lele26g0052 378 SUPERFAMILY F-box domain 24 80 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0052 Lele-ChrLele26 295148 296370 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele26g0052 Peptidase_M49 0.00014 CL0126