Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0046 ATGATCAACAACAGTCGATGTGAGGCCATATGTATCGACGGCACCAAGTGGCTCTGCCATATCTTTAGAAAGATGCACAAGAAGGTCTATATCGCCTCTGGCAATATAATCCTCATCAACCTCCACGACTACCAGGATGACAAGGTGGATGTAATCCTCAAGTACATGCCCGATGAGGCCAAGTTACTGAAGGCTTATAGAGAGTTGCCTGAAAATACCAGGCTAAACGAGGTTATTGGCGGTAGACTGGATGAGGAGGAGGATTGTCCTGGCAACGATTATATCGAGTTTGAGGACGATGACATTGATAAAATTTAA 318 0.4465 MINNSRCEAICIDGTKWLCHIFRKMHKKVYIASGNIILINLHDYQDDKVDVILKYMPDEAKLLKAYRELPENTRLNEVIGGRLDEEEDCPGNDYIEFEDDDIDKI 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0046 105 CDD S1_IF1A 1 69 IPR001253 GO:0003743|GO:0006413
Lele26g0046 105 PANTHER EIF-1A 1 105 IPR001253 GO:0003743|GO:0006413
Lele26g0046 105 SUPERFAMILY Nucleic acid-binding proteins 1 103 IPR012340 -
Lele26g0046 105 SMART eIF1neu4 4 70 IPR001253 GO:0003743|GO:0006413
Lele26g0046 105 ProSiteProfiles S1 domain IF1 type profile. 1 56 IPR006196 GO:0003723|GO:0003743|GO:0006413
Lele26g0046 105 Pfam Translation initiation factor 1A / IF-1 3 53 IPR006196 GO:0003723|GO:0003743|GO:0006413
Lele26g0046 105 Gene3D - 1 105 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0046 Lele-ChrLele26 271087 271404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0046 1 105 Eukaryotic Initiation Factors Gene Family AT2G04520 69.524 9.29e-47 145