Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0033 ATGAGACTTGAGGGTGTCTTCTTTCCGCTATTAGTTGGTAAAGTTGGGCGCACTGAGCTGATTATCCCAGTAATGGGCTGTTGTGTATCTTCTTTTTCCAACGATTCTATTCCCCACAACATCCCTCATTTGGATAATCACAAGAACAACATCCTCAATCTTCCTTCTTCCTCCAACGGCGCCGATAGTACCGCTGCTGCTGCTGACTTCCCGCCGTTCTTGGAGTTCTCCCTCGCCGACCTCAAAGCTGCCACCAACAACTTCAGCCCCGATCACATCGTCTCCGAGAGTGGCGAGAAAGCCCCCAATGTCGTCTACAAAGGTCGTCTACAGAACCAAAACCGCCGTTCTATTGCGGTCAAGAAATTCACTAAATTGGCCTGGCCCGACCCTAAACAGTTCGTGGAAGAAGCTTTCGGTGTTGGAAAATTAAGACACAAGAGGCTTGCCAATTTGATTGGTTATTGTTGTGATGGGGATGAGAGACTTCTCGTCGCAGAGTACATGCCCAACGATACCCTCGCCAAACATCTATTTCATTGGGAGAATCAGACAATTGAGTGGGCCATGCGGTTAAGAGTTGCCTTAAACATTGTTGAAGCATTAGATTATTGTCATAGAGAAGGCCATCCATTGTATCATGACTTGAATGCTTACAGAGTTCTCTTTGATGAGAATGGTGATCCCCGGCTTTCATGTTTTGGTTTGATGAAGAATAGCAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACGCCTCCTGAGTATCTGAGAAATGGGAGGGTGACCACGGAAAGTGTCATCTTCAGCTTTGGAACTGTGTTATTGGATCTACTAAGTGGAAAGCATATCCCGCCAAGTCATGCTCTCGATATGATAAGGGGCAAGAATATACTCATTCTTATGGATTCACATTTGGAGGGACACTTTTTAACTGATGAAGCAACTGTGGTTTTAGATCTAGCCTCACAATGTTTGCAGTATGAACCTCGGGAGCGGCCCAAGACCAGGGACCTTGTTATCACACTCTCCCCACTACAAAATAAACCTGATGTTCCATCAAATGTGATGCTTGGAATTCCAAAGCAAGAGGAAGCACCTCCTACTCTGCAGCATCCTCTTTCTCCAATGGGTGATGCTTGTTCTCGAATGGACCTTACAGCTATCCATCAAATTCTGTTAATGGCACACTACAGAGATGATGAAGGGACCAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTAGAGGCAAGAAAGCGTGGTGACTTGGCTTTTCGTGACAAGGATTTTAAGACTGCGATGGAGTGTTACTCCCAGTTCATCGAGGTGGGAACAATGTTATCCCCAACAGTGTATGCTCGGAGGAGTCTTTGCCATTTGATGTGTTATCAACCAGATGCTGCTCTTAGAGATGCAATGCAAGCACAATGTGTGTATCCTGAGTGGTCCACAGCATTTTACATGCAGGCTGTTGCTCTTTCCAAATTAAACATGGACAAAGATGCTACTGACATGCTCAATGAGGCTTCTACCCTTGAAGACAAAAGACGGGGCAAAGGCTCTTCCTCTAGATAG 1593 0.4545 MRLEGVFFPLLVGKVGRTELIIPVMGCCVSSFSNDSIPHNIPHLDNHKNNILNLPSSSNGADSTAAAADFPPFLEFSLADLKAATNNFSPDHIVSESGEKAPNVVYKGRLQNQNRRSIAVKKFTKLAWPDPKQFVEEAFGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALNIVEALDYCHREGHPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTTESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILILMDSHLEGHFLTDEATVVLDLASQCLQYEPRERPKTRDLVITLSPLQNKPDVPSNVMLGIPKQEEAPPTLQHPLSPMGDACSRMDLTAIHQILLMAHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAMECYSQFIEVGTMLSPTVYARRSLCHLMCYQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLNMDKDATDMLNEASTLEDKRRGKGSSSR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0033 530 ProSiteProfiles Protein kinase domain profile. 91 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0033 530 SUPERFAMILY TPR-like 421 521 IPR011990 GO:0005515
Lele26g0033 530 FunFam probable serine/threonine-protein kinase At5g41260 170 361 - -
Lele26g0033 530 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 58 523 IPR045845 GO:0004672|GO:0009742
Lele26g0033 530 FunFam probable serine/threonine-protein kinase At4g35230 418 527 - -
Lele26g0033 530 SUPERFAMILY Protein kinase-like (PK-like) 71 352 IPR011009 -
Lele26g0033 530 Gene3D Phosphorylase Kinase; domain 1 64 168 - -
Lele26g0033 530 Gene3D Transferase(Phosphotransferase) domain 1 170 361 - -
Lele26g0033 530 Gene3D Tetratricopeptide repeat domain 418 526 IPR011990 GO:0005515
Lele26g0033 530 FunFam probable serine/threonine-protein kinase At4g35230 63 168 - -
Lele26g0033 530 Pfam Protein kinase domain 104 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0033 Lele-ChrLele26 194801 199866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0033 76 352 Glycoside Hydrolase AT3G07070 34.868 2.47e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele26g0033 Pkinase 1.1e-27 CL0016