Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0024 ATGATTGAAAAGAAGGAGGAGTTTCTCATTGTGGCGCCATTTGAGTGCGCATGGCGAAGGGATTTGAAATTCCGAGAAGCCGGTCGGGGTTGCGTGGTTTTCGAAGCTTTTGGGCGCAATGATATCACATTGGTTTTTCGGGAGAATGGGGGGAGCCGGCATTACCATTATAAAAGGGATAGTAGCCCCCACTATACCGTAATTTTGGGGAGCCATAGGAATAGAAGGCTGAGAATTGAGGTTGATGGAAAAACTGTCGTTGATGTGGCTGGTGCTGGACTTTGTTGCTCTTCATCATTCCAGAGTTACTGGATCAGCATCTACGATGGGTTGATTAGCATCGGCAAAGGGAAGTATCCTTTCCAGAATATTGTCTTCCAGTGGCTGGATTCTAATCCTAACTATAATGTTCAGTATATTGGGCTCTGCAGCTGGGATAAACACGTTGGATATAGAAATGTTAATGTGTTGTCGTTAACACACAATCATATGTTTCAGTGGAAGCACGTGAGTTTTGGTGAATATGAAGTTGAGGAGGAGGGTGACGAGGAGTTGGGAGATAACCCGATGGATTATGACAACTGGGGCCTGAAAAATTTTCTGGAGAGCTGGGAATTGTCTGACGTTCTATTCTTTGTTGGTGCAGAGGAAAGACCTGTACCTGCTCATAAGGCCATTTTATCAGCATGTGGGGATTTTCCTATAGCCTCATCATTCTCTGTTATTTCGCTGCCCACAGTTACCTACCTGGTTTTTCACGCACTGCTGCAGTACATCTACGCTGGCTGGACTGAGATTCCTTTGGAACAACTGGGTTCCTTGAGGGCTCTAAGTTTACAGTTTGAAGTGACTCCGTTGGTTAAACAATGTGAAGAGACTATGGAGCGGTTTAAGCTAAACCAAAAGTTTGTCTCAGGGAAGAATGTGGAGTTATCATTTCCAAGTACTAGGCCTCATTGCTGTTCAACTTTGTCCTCACTTCCTGTCAGTAGTCAGAGACTGGAACAATTGCAATTAACTGGCCAGTACAGTGATGTAAACGTATATATTGAGGGTTATGGGCTTGTTGCCCAAGCGCATAAAATTGTTCTCAGTTTATGGAGCATCCCATTTGCTAAGATGTTCACAAACGGAATGAGTGAAAGCATGTCTTCAGAGATTACTTTAAGGGATGTGCCACCACAAGCTTTCAAAGCTATGTTTGACTTCTTATACAGTGGGAAACTGAATGATGAAGTTAATATAGATTCTGGTTCTTTGTTGCTGGAGCTGCTTTTATTGGCTGACCAATTTGGAGTGACTCTTCTTCACCAGGAGTGCTGTAAAATGCTTCTAGAATGCCTTTCAGAGGACTTATTATGTCCACTCCTTCAAGTGATTTCTTCGATCCCATCATGTAGACATATTAAAGAAACGTGTCAGAGGAAATTCTCCATGAACTTTGACTATTGTACTAGTGCGAGCACCTACTTTGTCTTGTTAGATGATACAACTTTCAGCAATATAATTCAGCATCCAGATTTGACTGTTACATCTGAAGAGAAAGTTCTCAATGCAATCCTAATGTTTGGCATGAAAACTCAAGAACTAGTCTCGTGGGAAGTGGTGGATGAGTTGATGATAAATTCAAAACCTGAACTTCTTTTTGGTGAGAGGCTTCAGTTAGTTCATGACTTGTTGCCATTTGTGAGATTTCCGCTACTTCCATATTCCTTGCTTAAAAAGTTGCAGAGTAGCAACACTAGCAGACACGTTCTTGTGTTTCAAAATCTTGTTAGTGAGGCTCTTAATTTTGTTGAAAGTGGACTGGCAAGCCCCGAAAATAAAGAGAATGTTAGATTCCTTCACAGACGATCTAGTTACAAGGAGCTCCAGTATATATGTGATGGGGATAGCAACGGAGTATTGTATTTTGCAGGCACATCATATGGACAACACCAGTGGGTTAATCCTGTTTTGGCAAAGACAATTACGATCACGGCTAGCAGTCCCCACTCAAGATACACTGACCCAAAGGTTTTGGCCTCGAGAACTTACCAGGGAACATCATTTGTGGGGCCTCGATTGGAAAATGGACATAATTGTGCCTGGTGGATGGTTGACCTTGGCAAAGATCATCAGCTCATGTGCAACTACTACACCTTGCGACAGGACGGTTCCAGGGCCTTCATGAGATTTTGGAATTTCCAGGGGTCTCTGGATGGGAAGAGCTGGACGAATTTGAGGGTTCATGAAAACGACACGACAGTGAGCAAGCCTGGTCAATTTGCATCTTGGCCCATAACAGGGCCCAACGCTCTGCTTCCCTTCAAGTATTTCCGGGTTGTTCTAACGGCTCCCACCACTGATGCCACTAATCCCTGGAACTTGTGCATTTGTTACTTGGAACTATATGGCTATTTCCTTTAG 2409 0.4334 MIEKKEEFLIVAPFECAWRRDLKFREAGRGCVVFEAFGRNDITLVFRENGGSRHYHYKRDSSPHYTVILGSHRNRRLRIEVDGKTVVDVAGAGLCCSSSFQSYWISIYDGLISIGKGKYPFQNIVFQWLDSNPNYNVQYIGLCSWDKHVGYRNVNVLSLTHNHMFQWKHVSFGEYEVEEEGDEELGDNPMDYDNWGLKNFLESWELSDVLFFVGAEERPVPAHKAILSACGDFPIASSFSVISLPTVTYLVFHALLQYIYAGWTEIPLEQLGSLRALSLQFEVTPLVKQCEETMERFKLNQKFVSGKNVELSFPSTRPHCCSTLSSLPVSSQRLEQLQLTGQYSDVNVYIEGYGLVAQAHKIVLSLWSIPFAKMFTNGMSESMSSEITLRDVPPQAFKAMFDFLYSGKLNDEVNIDSGSLLLELLLLADQFGVTLLHQECCKMLLECLSEDLLCPLLQVISSIPSCRHIKETCQRKFSMNFDYCTSASTYFVLLDDTTFSNIIQHPDLTVTSEEKVLNAILMFGMKTQELVSWEVVDELMINSKPELLFGERLQLVHDLLPFVRFPLLPYSLLKKLQSSNTSRHVLVFQNLVSEALNFVESGLASPENKENVRFLHRRSSYKELQYICDGDSNGVLYFAGTSYGQHQWVNPVLAKTITITASSPHSRYTDPKVLASRTYQGTSFVGPRLENGHNCAWWMVDLGKDHQLMCNYYTLRQDGSRAFMRFWNFQGSLDGKSWTNLRVHENDTTVSKPGQFASWPITGPNALLPFKYFRVVLTAPTTDATNPWNLCICYLELYGYFL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0024 802 SUPERFAMILY Galactose-binding domain-like 644 801 IPR008979 -
Lele26g0024 802 Gene3D Potassium Channel Kv1.1; Chain A 195 311 IPR011333 -
Lele26g0024 802 PANTHER OS05G0345500 PROTEIN 2 802 - -
Lele26g0024 802 Pfam F5/8 type C domain 658 790 IPR000421 -
Lele26g0024 802 Pfam BTB And C-terminal Kelch 460 527 IPR011705 -
Lele26g0024 802 SMART BACK_2 454 577 IPR011705 -
Lele26g0024 802 Pfam Farnesoic acid 0-methyl transferase 54 149 IPR022041 -
Lele26g0024 802 ProSiteProfiles BTB domain profile. 344 413 IPR000210 GO:0005515
Lele26g0024 802 ProSiteProfiles BTB domain profile. 207 268 IPR000210 GO:0005515
Lele26g0024 802 SMART BTB_4 207 298 IPR000210 GO:0005515
Lele26g0024 802 SMART BTB_4 344 448 IPR000210 GO:0005515
Lele26g0024 802 Pfam BTB/POZ domain 335 446 IPR000210 GO:0005515
Lele26g0024 802 Pfam BTB/POZ domain 197 295 IPR000210 GO:0005515
Lele26g0024 802 SUPERFAMILY POZ domain 331 445 IPR011333 -
Lele26g0024 802 Gene3D - 479 599 - -
Lele26g0024 802 SUPERFAMILY POZ domain 196 295 IPR011333 -
Lele26g0024 802 CDD BTB_POZ_ZBTB_KLHL-like 343 414 - -
Lele26g0024 802 Gene3D - 652 800 - -
Lele26g0024 802 Gene3D Potassium Channel Kv1.1; Chain A 326 478 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0024 Lele-ChrLele26 147892 153306 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0024 26 147892 153306 Lele27g2068 27 24582563 24596588 hybridization
Lele26g0024 26 147892 153306 Lele28g0029 28 151255 157164 hybridization