Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0020 ATGGGAAACTGCCTGGGCAAAATTAGAACGAGGACGAACAGTGCTCCAGCTTCAGAGTTGGATTGGGAGGGGCCAAGTCCCACGGGGGATATCGTGAAGCCAAATCTAAAAATGTTCTGCTTGGATGATTTGAAGAGTGCCACCAGAAACTTCAGACCCGACACGGTGCTGGGGGAGGGCGGCTTTGGCAGAGTATTCAAGGGATGGATCGACCAAAACACCCTCAAGCCCTCCAAAATTGGCGTCGGAATCCCCGTTGCCGTCAAGAAATCTAATCCCGATAGTCTCCAGGGCTTGGAAGAATGGCAGAGCGAGGTGAAATTCCTGGGGAAGTTCTCCCATCCAAACCTGGTGAAGCTGATTGGCTACTGCTGGGAGGAGAATCAGTTTATGCTTGTATACGAGTACATGCGAAAGGGCAGCTTGGAAAACCACCTGTTTGGAAGAGGACCCGACCCGCTTGCATGGGACATAAGGCTTAAGATCGCCATAGGAGCAGCTCGAGGCCTGGCCTTCCTCCACGCCTCCGAGAAGTCCGTCATCTATCGCGACTTCAAGTCCTCCAACATTTTGCTGGATGGGGAGTTCAATGCGAAGCTTTCAGATTTCGGGCTGGCAAAGCTTGGCCCCGTCAACGGCAGATCCCACATAACCACTAGGGTCATGGGCACTTACGGTTATGCGGCCCCCGAGTACATAGCCACCGGTCATCTGTACGTGAAGAGCGATGTGTACGGCTTTGGAGTTGTGCTGCTGGAAATTCTGACGGGCTTAGTGGCTCTTGATCCCAACAGGCCCACCAGTGAGCATAATTTGGTGGAATGGAAGAGACCCTATTTGAGCGATAAGAAGAAGCTCCGAACCTTAATTGACCCCAAACTGGGCCACATGTATTCCCCAAGAGCAGCCTTTAACATATGCCGCCTCATTCTCCAGTGTTTAGAATCCGACCCTAAAAATCGACCCTCCATGCAAGTTGTCCTGTCCACTCTAGAGAAAGCCTATCGCATCCCATATAATCCCAAGCCCATCAAGCCCAGTTCCGTTCAACCACCCTGA 1059 0.5203 MGNCLGKIRTRTNSAPASELDWEGPSPTGDIVKPNLKMFCLDDLKSATRNFRPDTVLGEGGFGRVFKGWIDQNTLKPSKIGVGIPVAVKKSNPDSLQGLEEWQSEVKFLGKFSHPNLVKLIGYCWEENQFMLVYEYMRKGSLENHLFGRGPDPLAWDIRLKIAIGAARGLAFLHASEKSVIYRDFKSSNILLDGEFNAKLSDFGLAKLGPVNGRSHITTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGLVALDPNRPTSEHNLVEWKRPYLSDKKKLRTLIDPKLGHMYSPRAAFNICRLILQCLESDPKNRPSMQVVLSTLEKAYRIPYNPKPIKPSSVQPP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0020 352 Gene3D Transferase(Phosphotransferase) domain 1 137 339 - -
Lele26g0020 352 Pfam Protein tyrosine and serine/threonine kinase 55 330 IPR001245 GO:0004672|GO:0006468
Lele26g0020 352 FunFam Serine/threonine-protein kinase BIK1 26 136 - -
Lele26g0020 352 SUPERFAMILY Protein kinase-like (PK-like) 30 346 IPR011009 -
Lele26g0020 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Lele26g0020 352 ProSitePatterns Protein kinases ATP-binding region signature. 57 90 IPR017441 GO:0005524
Lele26g0020 352 Gene3D Phosphorylase Kinase; domain 1 35 136 - -
Lele26g0020 352 CDD STKc_IRAK 57 333 - -
Lele26g0020 352 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 137 340 - -
Lele26g0020 352 PANTHER OS01G0588500 PROTEIN-RELATED 30 333 - -
Lele26g0020 352 ProSiteProfiles Protein kinase domain profile. 51 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0020 Lele-ChrLele26 113165 114943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0020 37 347 Glycoside Hydrolase AT3G07070 46.729 8.22e-96 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele26g0020 PK_Tyr_Ser-Thr 1.8e-45 CL0016