Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0007 ATGGTTCCACTCATACATTTCTCTCTGAAGTCTGAAACCTTTCTTTTGTTGCATCATCCTCTAGCAGCATATGCAGCTCTTAAGCCATCACCTGGGACTGTACAGTGGTTTTCTTCTCTGGGGAAGACATACTCGGATATTTGGACTGAAATGGAAAAACTAGAAAGTTTGAGGAAACACAGAATTTCATCCCATGGTCCAAGGGCTGTATGCGTCCTATCAGCAAATGGAGCCATATCTAATGTGACACTCCGTCAAGCTGCCACATCTGGTGGAACTGTGACCTATGAGGGACGGTTTGAGATCCTATCACTATCTGGTTCTTTTCTTCTATCTGAACATACTAGTCAGCGGACTAGAACTGGTGCATTAAGTGTATCCTTGTCTGGACCAGATGGCCGTGTTTTAGGTGGGGGAGTTGCTGGACTTTTGACAGCTGCTTCACCTGTGCAGGTTGTTGTAGGGAGCTTCATTGCAGATGGTGGGAAGGCACCAAAGTCTGCAAACCAATTGGAAATAGTATCTGCCCCACCAAAGTTGGCCCCAAGCAGTGGTCCAGTGGGGCAGAGCAACTCCCCATCACAGGGCAGTCATAGTGAATCGTCAGGAGGACCTGGGAGCCCACTTTACCCAAGCACAGGAGAAGCCTGCAATAGCAGTAAGCTACAAAGCATTTCATGCATGCCGTGGAAATAA 696 0.4756 MVPLIHFSLKSETFLLLHHPLAAYAALKPSPGTVQWFSSLGKTYSDIWTEMEKLESLRKHRISSHGPRAVCVLSANGAISNVTLRQAATSGGTVTYEGRFEILSLSGSFLLSEHTSQRTRTGALSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGGKAPKSANQLEIVSAPPKLAPSSGPVGQSNSPSQGSHSESSGGPGSPLYPSTGEACNSSKLQSISCMPWK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0007 231 CDD DUF296 61 157 IPR005175 -
Lele26g0007 231 SUPERFAMILY AF0104/ALDC/Ptd012-like 62 158 - -
Lele26g0007 231 ProSiteProfiles PPC domain profile profile. 37 179 IPR005175 -
Lele26g0007 231 MobiDBLite consensus disorder prediction 184 231 - -
Lele26g0007 231 MobiDBLite consensus disorder prediction 177 231 - -
Lele26g0007 231 Gene3D - 51 176 - -
Lele26g0007 231 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 62 208 IPR039605 GO:0003680
Lele26g0007 231 Pfam Plants and Prokaryotes Conserved (PCC) domain 63 157 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0007 Lele-ChrLele26 41967 44736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0007 62 231 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 62.644 2.51e-57 184