Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2070 ATGAGTTGCTTCCCGTGTTGTGCATCGAAAGAAAGGATCAACCGGAAGGCATTGCAGAAGAGCAGCAAGGAGAACCATGCTTCAAAATCTATAGCCTCATTTGCCAACATTTCTTTTAAAAGTGATGCCAGCAGGCAAAGGTACATAACGGAAGAAATCAAGAAGATTGGAAAAGGAAATATTACTGCGAAAATCTTCAGCTATCGAGAGCTATGTGTTGCAACCCAGAAGTTTCACCATGACAACCTAATTGGTGAAGGAGGCTTTGGCAGGGTATACAAAGGATATCTCGGAAGCACGAATCAAGTTGTTGCGGTGAAGCAACTTGATAGGAACGGATTCCAAGGAAACAAAGAATTTCTTGTAGAGGTTTTGCTTTTGAGTCTCTTGAACCACCCCAACCTCGTCAATTTGGTAGGTTATTGTGCTGATGGTAATCAGAGAATTTTGGTCTACGAGTACATGGTCAATGGTTCTTTAGAAGATCACCTTCTTGAATTAACTGATGAAGATAGAAAGCCGTTGGATTGGAGTACCAGAATGAAAATTGCTCAAGGTGCAGCGAGAGGACTTGAATATTTACATGAGGTAGCAAACCCGCCGGTGATATACAGGGATTTCAAGGCATCAAATATCCTATTGGATGAAGAATTTAATCCAAAACTTTCTGATTTTGGACTCGCAAAACTTGGTCCAACTGGAGAACACTCTCATGTGTCCACAAGAGTGATGGGAACGTATGGCTATTGTGCTCCTGAGTATGCATTCACAGGACAGCTGAGTACTAAATCAGATGTATATAGTTTTGGAGTTGTTTTCTTGGAAATGATATCGGGAAGAAGAGTGATTGATCATTCAAAGCCAACTGAAGAGCAAAACTTAGTCCTTTGGGCGCAACCACTATTGAAAGACAAAAGAAAGTTCACTTCAATCGTTGATCCATTACTAGAAGATGATTACCCCATAAAGGGTCTCCACCAAGCTCTAGCAGTTGCAGCAATGTGTCTCCAAGAGGAAGCTTCTACTCGGCCTTTGATTAGCGACGTAGTCTCCGCTATGGAGTTCCTGGCCAAGAAGAATGTGAAAGGTGATGATGAAGAAAACGATGAAAATATTTTTGACTCTTCTACTGAGGAGGATGACGACGGGGACTGCAGTATTGGAGGCTATGAATCTGATAGCATACTTGATCGCAAGAAACAAGATTAA 1209 0.4169 MSCFPCCASKERINRKALQKSSKENHASKSIASFANISFKSDASRQRYITEEIKKIGKGNITAKIFSYRELCVATQKFHHDNLIGEGGFGRVYKGYLGSTNQVVAVKQLDRNGFQGNKEFLVEVLLLSLLNHPNLVNLVGYCADGNQRILVYEYMVNGSLEDHLLELTDEDRKPLDWSTRMKIAQGAARGLEYLHEVANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGEHSHVSTRVMGTYGYCAPEYAFTGQLSTKSDVYSFGVVFLEMISGRRVIDHSKPTEEQNLVLWAQPLLKDKRKFTSIVDPLLEDDYPIKGLHQALAVAAMCLQEEASTRPLISDVVSAMEFLAKKNVKGDDEENDENIFDSSTEEDDDGDCSIGGYESDSILDRKKQD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2070 402 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Lele25g2070 402 FunFam Serine/threonine-protein kinase PBS1 155 371 - -
Lele25g2070 402 PANTHER OS07G0668900 PROTEIN 3 362 - -
Lele25g2070 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lele25g2070 402 SUPERFAMILY Protein kinase-like (PK-like) 62 351 IPR011009 -
Lele25g2070 402 MobiDBLite consensus disorder prediction 360 402 - -
Lele25g2070 402 ProSiteProfiles Protein kinase domain profile. 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g2070 402 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Lele25g2070 402 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Lele25g2070 402 Gene3D Transferase(Phosphotransferase) domain 1 155 382 - -
Lele25g2070 402 CDD STKc_IRAK 84 354 - -
Lele25g2070 402 MobiDBLite consensus disorder prediction 367 387 - -
Lele25g2070 402 Pfam Protein kinase domain 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2070 Lele-ChrLele25 28042031 28045228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g2070 1 357 Glycoside Hydrolase AT3G07070 61.281 2.23e-157 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele25g2070 Pkinase 5.8e-48 CL0016