Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2062 ATGGGAAACGCCAACGGCAAAGAAGATGGAGCCATTGGCGGCGATGATCGATCAGCCGCTGAATCTGTCATCCCTAGCAGTTTCGCGCCGACTTCTCAGCCTCCAGTTCGGGCTGCTTCAATCGATCCCATGGCGAATAGTCCGCCTCCTAGTCCTGGTCGATCTCGATCACCGGTCTTGTTCGCTCCTCAGGCTCCTCTAGCTCCACTGCAAAGAGGTAATGGTCCTCATTTTCTCAACCAAATGTGGCAGAATGAATCTCATGGGATTGTTGATCAATCTCCTGAGCGAGGAGTCCCTGTCATGATTACATGGAGTTATGGTGGAAACAATGTGGCTGTGCAGGGATCCTGGGATAATTGGACTTCGAGGAAGCAACTGCAGAGAGCCGGCAAGGATCATTCGATTGTTATGGTCCTCCCTTCTGGCATATATCATTACAAGTTCATTGTTGATGGTGAACAGAGATATATACCTGAACTTCCTTATGTAGCTGATGAGATGGGTTGTGTCTGCAATCTTCTTGATGTTAATGATTATGTACCTCAAATTCCCGAGAGTATCAGTGAATTTGAGCCTCCACCCTCTCCAGAAGCCAGTTATGGCCAAGCGTTTCCAGCTGAAGAAGACTTTGCCAAAGAACCAATGGTGGTTCCTCAACAGCTGCATCTCACTGTCCTTGATATGGAGAATTCAGATGTAGGTACCTCTTCAAAGCCTCAACACGTTGTGCTAAACCATGTTTTCATTGAAAAAAACTTGGCCGCCCAGTCTGTGGTTGCACTGGGACTGACTCACAGGTTCCAGTCCAAATATGTGACCGTTGTTCTCTACAAACCACTCAAAAGGTAG 852 0.4765 MGNANGKEDGAIGGDDRSAAESVIPSSFAPTSQPPVRAASIDPMANSPPPSPGRSRSPVLFAPQAPLAPLQRGNGPHFLNQMWQNESHGIVDQSPERGVPVMITWSYGGNNVAVQGSWDNWTSRKQLQRAGKDHSIVMVLPSGIYHYKFIVDGEQRYIPELPYVADEMGCVCNLLDVNDYVPQIPESISEFEPPPSPEASYGQAFPAEEDFAKEPMVVPQQLHLTVLDMENSDVGTSSKPQHVVLNHVFIEKNLAAQSVVALGLTHRFQSKYVTVVLYKPLKR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2062 283 SUPERFAMILY E set domains 97 179 IPR014756 -
Lele25g2062 283 Gene3D Immunoglobulins 91 181 IPR013783 -
Lele25g2062 283 MobiDBLite consensus disorder prediction 1 60 - -
Lele25g2062 283 CDD E_set_AMPKbeta_like_N 100 177 - -
Lele25g2062 283 Gene3D - 187 281 - -
Lele25g2062 283 SMART AMPKBI_2 194 281 IPR006828 GO:0005515
Lele25g2062 283 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 212 280 IPR006828 GO:0005515
Lele25g2062 283 Pfam Glycogen recognition site of AMP-activated protein kinase 99 179 IPR032640 -
Lele25g2062 283 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 283 IPR043554 -
Lele25g2062 283 SUPERFAMILY AMPKBI-like 181 281 IPR037256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2062 Lele-ChrLele25 27933373 27937935 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g2062 25 27933373 27937935 Lele27g0013 27 123736 128497 hybridization
Lele25g2062 25 27933373 27937935 Lele28g2115 28 24015727 24019868 hybridization