Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2057 ATGAGTAATCTCATCCGTCGATTTCATGAGTCATATGTCAACGGACAAAATCCATTACACACTGTAGCTGCTGCTGCCCAGCGCGAACAGTACGTCCCGAGAGCGTGGCGTAATCTCCAGCTGGGTATGGATTCATCTGAGCCAGAAGGAAATGGGTCGGAGGGCTCTTTGCCGCCGCCGCCTCCTGTCCCACCAAATGCTGTGCCAGTGATAGCAGATCAAGGACTTCCTCTTGAACCTGTCAAGAAGGTTTCCCGGGTTCCAATTGCCAGACGAGGATTAGGATCCAGAGGAAGTAAATTGTCTCTTTTAACTAACCACTTCAAAGTCAATGTTAAGAACACCGATGGCTATTTCTTCCACTACAGTGTATCATTTTCTTATGAAGATGGCCGCCCTGTAGAAGGTAAGGGTGTTGGAAGAAAAATCATTGGCAGGGTGCAGGAGACTTATGACTCTGAGTTAGCAGGGAAGGACTTAGCCTATGACGGGGAGAAGAGTTTGTTTACGGTTGGTCCTCTTCCTCGAAACAAGCTTGAATTCACTGTTGTTTTGGAGGATCTCACATCAAACAGGAATAATGGCAATTGCAGCCCTGATGCTCATGGGAGTCCGAATGAGAGTGACAAGAAGAGGATGCGTCGCCCAAATCGTTCCAAAACATTTAAAGTGGAAATCAGTTATGCTGCTAAAATCCCTATGCAGGCTATCACTAATGCACTGCGGGGTCAAGATTCTGAAAATTTTCAAGAAGCGATCAGGGTGTTTGATATCATATTAAGGCAACATGCTGCCAAGCAAGGGTGTTTGCTTGTTCGTCAATCTTATTTCCACAATGATCCAAGGAGTTTTGCTGACGTTGGAAGTGGGGTTTTAGGCTGCAGAGGATTCCATTCAAGTTTCAGAACTACACAAAGTGGTTTATCACTTAACATAGATGTATCTACTACCATGATCGTACAGCCTGGGCCCGTGGTGGACTTTTTAATAGCCAACCAGAATGTGCGAGATCCTTATTCAATTGACTGGGCAAAGGCCAAAAGGACGCTTAAAAATCTGAGGATTAAGACTAGCCCAGCCAATCAAGAGTACAAGATAACTGGGCTTAGTGATCTCCCATGCAAAGAGCAGACGTTTTCTCTGAAAAACAAAAGTGGAAAGGATGGCAATGATGATTCCGAGGAAGTGACTGTTTACGATTATTTTGTTAATCATCGTAAGATAGATCTCCGTTATTCTGGTGATCTTCCGTGTATCAATGTTGGAAAACCAAAACGTCCTACTTTCTTCCCTCTTGAGCTTTGCTCTTTGGTATCCCTACAACGATATACAAAATCACTGTCTACCCTTCAAAGGGCTTCACTGGTGGAGAAATCTAGGCAGAAGCCCCAAGAGCGGATGAGAGTTTTGTCAGATGCTTTAAAAAGCAACAAGTATGACTCTGAACCCATGCTTCATAATTGCGGGGTTTCACTAAGCAATGGCTTTACCGAAGTGGAGGGTCGCGTTTTGCAGGCTCCAAGGTTGATGTTTGGTGACCGGGAGGATAACCCAAGAAATGGGAGATGGAACTTGAACAATAAGAAAATAGTGCAGCCATCAAGGATAGAAAAATGGGCTGTGGTGAACTTTTCTGCTCGTTGTAATACACCTGGGCTTGTGCGAGATCTGATTAAATGTGGAGGAATGAAAGGAGTTCTCATAGAAGAACCATTTTGTGTCTTTGAAGAAAAACCTCAGTTTAGACGTGACCCACCTGTGATGAGAGTGGAGAAAATGTTTGAAGAGATCCAGTCGAAACTTCCTGGACCTCCCAAGTTCCTTCTCTGTCTTCTTCCTGAACGGAAAAACTCTGATCTTTATGGTCCATGGAAACGGAAGAATCTTTCTGAGTTTGGAGTGGTCACTCAGTGCATAGCTCCTACAAGGGTCAACGACCAATATCTCACTAATGTTCTGATGAAGATCAATGCTAAGCTTGGTGGTCTGAATTCAATGCTATCAATTGAACATACACCGTCAATTCCTGTTGTTTCCAAAGATCCCACCATCATTCTTGGCATGGATGTATCACATGGTTCACCGGGACAGTCTGATATCCCTTCAATTGCAGCGGTAGTCAGCTCTAGACAATGGCCTCTGATATCAAAGTATAGGGCATGTGTCCGTACCCAGTCTCCAAAGGTTGAAATGATTGATAATTTGTTCAAGCCAGGGTCTGAGAAGGAGGATGAAGGCATCGTCAGGGAACTTCTGATTGACTTCTATGTAACTTCTAAGAGAAAACCACAAAATATAATAATATTCAGGGATGGGGTGAGTGAATCACAGTTCAATCAAGTATTGAACATTGAGCTCAATCAAATCATTGAGGCCTGTAAATTTCTTGATGATCAGTGGTGTCCCAAATTTGTGGTAATTGTTGCCCAGAAAAACCACCACACAAAATTTTTCCAGCCTTCATCTCCTGACAACGTTCCCCCAGGAACCGTTATTGATAATAAAATATGCCATCCACGGAACTATGACTTTTATTTATGTGCACATGCTGGAATGATAGGAACTACCAGGCCTACGCATTACCATGTTTTGTTGGATGAGGTTGGTTTCTCTCCTGATGATCTGGAGGGACTTGTGCATTCGTTATCATATGTGTATCAGCGGAGCACCACTGCCATATCTGTAGTTGCTCCAATATGCTATGCACACTTGGCTGCAACTCAGATGGGACAGATGATCAAATTTGAAGACAAGTCTGAGACTTGTTCGAGCCAGGGTGGGCACTCATCTGCTGGAGCGGTTCCTGTGCCCCAGTGCCCCGAGTTGCAGGACAACGTCCGCAACTCCATCTATGTCCTCATTGTGAGAGATGATAGGCGGCTAAGATTAGATTTCGAATTGACACTTGGAGAAAACAATGGATCCAATGACAAGATTGTGCTCTCTTTTCATTGGAACATTCTGTTGGTACACCTCCCTCTCTTTCTCGCCGCCGCCGTTCCCTCACCTTCCCTATCTGCTAAGGTCATAGACATGGTTGAACAGGGCAGCCAGAGGAAGAGGCCAAACATACTGGTGACTGGTACACCAGGGACAGGAAAGACAACAATGTCCTCTGCTCTAGCGGAGGCAGTCCAACTTCGCCACATCAATATTGGAGAATTGGTCAAAGAAAAGAACTTGCATGATGGGTGGGATGGTGAGCTTGATTGTTATGTCATTAATGAAGACCTGGTCTGCGATGAGCTTGAAGACATTATGGAAGGAGGAGGGAACATTGTGGACTACCATGGCTGTGATTTCTTTCCTGAACGATGGTTCGATTGTGTGGTGGTACTTCAAACTGATAACTCTGTGTTGTATGACCGTTTGAGCAAGAGAGGGTACAATGATTCAAAGCTTTCCAACAATATTGAGAGCGAAATCTTTCAAGTTCTGCTTGAGGAAGCTAAAGAAAGTTACCCAGAGGATAGAGTTATTGCATTAAGGAGTGATAATATTGAAGACATAAATAGAAATACTGCAACTCTAACAGAACTAGTCTATCAGCTTATGTACAACATATCCTCCTCAAAGTCCAATGACCCAGAAAGAAAGGATGCATTCGGAAACGTTGGGAGACTTGGCAATCAGCAGCCCTCGCACAGGCAAGGTTTAAGCAATCCAAACCAATATTGA 3678 0.4415 MSNLIRRFHESYVNGQNPLHTVAAAAQREQYVPRAWRNLQLGMDSSEPEGNGSEGSLPPPPPVPPNAVPVIADQGLPLEPVKKVSRVPIARRGLGSRGSKLSLLTNHFKVNVKNTDGYFFHYSVSFSYEDGRPVEGKGVGRKIIGRVQETYDSELAGKDLAYDGEKSLFTVGPLPRNKLEFTVVLEDLTSNRNNGNCSPDAHGSPNESDKKRMRRPNRSKTFKVEISYAAKIPMQAITNALRGQDSENFQEAIRVFDIILRQHAAKQGCLLVRQSYFHNDPRSFADVGSGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVQPGPVVDFLIANQNVRDPYSIDWAKAKRTLKNLRIKTSPANQEYKITGLSDLPCKEQTFSLKNKSGKDGNDDSEEVTVYDYFVNHRKIDLRYSGDLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQERMRVLSDALKSNKYDSEPMLHNCGVSLSNGFTEVEGRVLQAPRLMFGDREDNPRNGRWNLNNKKIVQPSRIEKWAVVNFSARCNTPGLVRDLIKCGGMKGVLIEEPFCVFEEKPQFRRDPPVMRVEKMFEEIQSKLPGPPKFLLCLLPERKNSDLYGPWKRKNLSEFGVVTQCIAPTRVNDQYLTNVLMKINAKLGGLNSMLSIEHTPSIPVVSKDPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPGSEKEDEGIVRELLIDFYVTSKRKPQNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDDQWCPKFVVIVAQKNHHTKFFQPSSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLEGLVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQMIKFEDKSETCSSQGGHSSAGAVPVPQCPELQDNVRNSIYVLIVRDDRRLRLDFELTLGENNGSNDKIVLSFHWNILLVHLPLFLAAAVPSPSLSAKVIDMVEQGSQRKRPNILVTGTPGTGKTTMSSALAEAVQLRHINIGELVKEKNLHDGWDGELDCYVINEDLVCDELEDIMEGGGNIVDYHGCDFFPERWFDCVVVLQTDNSVLYDRLSKRGYNDSKLSNNIESEIFQVLLEEAKESYPEDRVIALRSDNIEDINRNTATLTELVYQLMYNISSSKSNDPERKDAFGNVGRLGNQQPSHRQGLSNPNQY 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2057 1225 Gene3D - 674 952 IPR036397 GO:0003676
Lele25g2057 1225 Pfam Argonaute linker 1 domain 272 320 IPR014811 -
Lele25g2057 1225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 80 916 - -
Lele25g2057 1225 SUPERFAMILY Ribonuclease H-like 591 912 IPR012337 -
Lele25g2057 1225 SUPERFAMILY PAZ domain 317 479 IPR036085 GO:0005515
Lele25g2057 1225 ProSiteProfiles PAZ domain profile. 364 439 IPR003100 GO:0005515
Lele25g2057 1225 Pfam AAA domain 1024 1143 - -
Lele25g2057 1225 Gene3D paz domain 316 443 - -
Lele25g2057 1225 Hamap Putative adenylate kinase. 1022 1187 IPR020618 GO:0004017|GO:0005524|GO:0016887
Lele25g2057 1225 FunFam Protein argonaute 3 675 953 - -
Lele25g2057 1225 Pfam PAZ domain 326 455 IPR003100 GO:0005515
Lele25g2057 1225 MobiDBLite consensus disorder prediction 42 68 - -
Lele25g2057 1225 MobiDBLite consensus disorder prediction 1192 1225 - -
Lele25g2057 1225 MobiDBLite consensus disorder prediction 54 68 - -
Lele25g2057 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1020 1171 IPR027417 -
Lele25g2057 1225 Pfam Argonaute linker 2 domain 465 511 IPR032472 -
Lele25g2057 1225 CDD Piwi_ago-like 483 908 IPR045246 -
Lele25g2057 1225 FunFam Protein argonaute 7 317 443 - -
Lele25g2057 1225 MobiDBLite consensus disorder prediction 192 217 - -
Lele25g2057 1225 Pfam N-terminal domain of argonaute 101 260 IPR032474 -
Lele25g2057 1225 CDD PAZ_argonaute_like 322 438 - -
Lele25g2057 1225 ProSiteProfiles Piwi domain profile. 607 914 IPR003165 GO:0003676
Lele25g2057 1225 Gene3D - 503 668 - -
Lele25g2057 1225 SMART Piwi_a_2 607 914 IPR003165 GO:0003676
Lele25g2057 1225 FunFam Adenylate kinase isoenzyme 6 homolog 1016 1188 - -
Lele25g2057 1225 Pfam Piwi domain 608 914 IPR003165 GO:0003676
Lele25g2057 1225 SMART DUF1785_2 270 322 IPR014811 -
Lele25g2057 1225 Gene3D - 1014 1187 IPR027417 -
Lele25g2057 1225 MobiDBLite consensus disorder prediction 1207 1225 - -
Lele25g2057 1225 Pfam Mid domain of argonaute 517 596 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2057 Lele-ChrLele25 27887417 27901094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g2057 91 951 Eukaryotic Initiation Factors Gene Family AT5G43810 34.547 1.46e-154 487