Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2052 ATGACGATATTCGATGACATGGCCTTTTCTGACGATCTGGATATCATAGCTGCTCCGTTTGGGGAAGGCACTAGCTCCGCCCAGCCATCTGAACCAAATTCGACAATGGAGAACGATGACAGTGACGATGATGAAGACCTCGATGCGGATGAGCTTGAGAGGAGGATCTGGAAGCACAAACTCCAGCTGAAGCGCCTAAGAGAGCAAGGCAGAGCAAGAGAACATGGAATTGAACTCTCCATGCAAAGGCAACAAAATACTGAAGAACAGGCTAGGAGGAAGAAGATGGCCAAAGCTCAAGATGGAATCTTGAGGTATATGCTCAAGATGATGGAGGTTTGTCAGGCTCAAGGCTTCGTGTACGGCATCATTCCTGAGAATGGAAAACCCGTCACCGGAGCTTCAGACAACCTCCGTGAGTGGTGGAAGGATAAAGTCAGATTTGATAGGAACGGCCCCGCGGCCATCACCAAAGATCGGGCAGAAAGCCTTGCCAGCAAGAGCAGTGGGCTGAATGCCGGGGTTCCAACGCCTTGCACTTTGCAACAGATTCAGGACACAACACTGGGCTCTCTCTTGTCAACTCTGATGCAGCACTGTGATCCCCCTCAGAGGCGATACCCATTGGAGAAGGGTGTTGCACCGCCGTGGTGGCCGACGGGGAGCGAAGAATGGTGGACCCAGATCGGATTTCTAGGGACAACCATCAGCTCCAGTGTCCTTACAAAAGCTTTAGTTCAAGTTATAAGGCTTCATCATCAGCAGAAGTTTTCAATATTGATCAAATTAGGGCAATCTTAA 801 0.4994 MTIFDDMAFSDDLDIIAAPFGEGTSSAQPSEPNSTMENDDSDDDEDLDADELERRIWKHKLQLKRLREQGRAREHGIELSMQRQQNTEEQARRKKMAKAQDGILRYMLKMMEVCQAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKDRAESLASKSSGLNAGVPTPCTLQQIQDTTLGSLLSTLMQHCDPPQRRYPLEKGVAPPWWPTGSEEWWTQIGFLGTTISSSVLTKALVQVIRLHHQQKFSILIKLGQS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2052 266 MobiDBLite consensus disorder prediction 18 49 - -
Lele25g2052 266 SUPERFAMILY DNA-binding domain of EIN3-like 179 232 IPR023278 GO:0003700|GO:0005634
Lele25g2052 266 Gene3D - 176 263 IPR023278 GO:0003700|GO:0005634
Lele25g2052 266 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 33 231 IPR006957 GO:0005634
Lele25g2052 266 Gene3D - 85 168 IPR023278 GO:0003700|GO:0005634
Lele25g2052 266 Pfam Ethylene insensitive 3 50 234 IPR006957 GO:0005634
Lele25g2052 266 Coils Coil 49 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2052 Lele-ChrLele25 27844134 27845463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g2052 3 231 EIL Transcription Factor Family AT3G20770 63.362 2.85e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lele25g2052 EIN3 8.8e-90 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g2052 25 27844134 27845463 Lele27g0025 27 215523 217739 hybridization
Lele25g2052 25 27844134 27845463 Lele28g2105 28 23932233 23933707 hybridization