Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2049 ATGGCAGACAAGGCGGTGACCGTCCGAACCAGGAAATTTATGACAAACAGGCTTCTATCTCGCAAGCAGTTTGTCATTGATGTACTTCATCCTGGGAGGCCAAACGTGTCCAAGGCGGAGCTTAAGGAGAAGCTGGCAAGGATGTACGATGTCAAAGACCCCAATGCGATCTTTGTCTTCAAGTTTAGAACTCATTTTGGAGGCGGGAAATCAACTGGATTTGGTTTAATTTATGATTCCGTTGAAAATGCGAAGAAGTATGAGCCCAAGTACAGACTTATCAGGAATGGACTCTCCACTAAGGTAGAGAAGTCAAGGAAGCAAATGAAAGAGAGGAAGAACCGGGCTAAGAAGATCCGTGGAGTGAAGAAGGTCAAGGCTTCTGAGTCGGCAAAGAAGAAATGA 405 0.4543 MADKAVTVRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARMYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLSTKVEKSRKQMKERKNRAKKIRGVKKVKASESAKKK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2049 134 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele25g2049 134 Gene3D - 1 134 - -
Lele25g2049 134 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Lele25g2049 134 FunFam 40S ribosomal protein S24 1 134 - -
Lele25g2049 134 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele25g2049 134 MobiDBLite consensus disorder prediction 110 134 - -
Lele25g2049 134 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Lele25g2049 134 MobiDBLite consensus disorder prediction 101 134 - -
Lele25g2049 134 PANTHER 40S RIBOSOMAL PROTEIN S24 1 130 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2049 Lele-ChrLele25 27827332 27828578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g2049 1 133 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 85.714 1.83e-83 239