Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2045 ATGGATGTTCAAGTAATAAATGTGGAAGAAGGGACTGGTCATCAAGCTATGACCGATGATGGGGATGCTGAACCTAGTGAAGGTGAAGTTAATAATGCTGCAAACTCAGGATCTCATGTTGAGGATGGAATTCCTGAGCCATTTGTTGGTATGGAGTTTGATTCTGAAGATGCTGTGAGGACTTTCTACAATGAGTATGCCAAACGCGTGGGTTTCACCACTAAAGTTGGCCAATATGGCCGTTCTAAAGTTGATGGGGCAATCATGTATCGAGAGTATGTCTGTGGTAAGGAAGGTTTAAAAAGAAGGCTAGGTGACAGCTGTGATGCAATGATTAAAGTAGAGTTAAAGGGTCAAAATAAATGGGTCATAACAAAATTTGTAAAGCAGCATAGCCATTCCATGGCGAATCCCAATAAGGTGCATCACCTTCGGCCACGTAAGCATTTTTCTAGTGTTGGAAAGACCATGCCTGAAACTTACCAGGGAGTGGGACTTGTTCCAAGTGGTGTCATGTATGTATCTATGGACGGTAATTGTGTTTCTAATGAGAATATTCGTGAAGCTAAGAACACTCCCCTTGAACCAAGTCATGTAGCAAGGAATTCTACAATGATGAATAATACTGGTAGGCCTCCTATTCGAAAGAGGACATTGGGGAGAGATGCTCAGAACCTACTAGAGTATTTTAAAAAAATGCAGGCCGAGAATCCTGGTTTCTTCTATGCTATACAACTTGATGAAGAAAATCGTATGTCAAATGTATTTTGGGCCGATGCAAGATCAAGGACGGCATACAGTCATTTTGGTGATGCAGTGACCCTAGACACAACATACAAAGTGAATCAATACAAAGTTCCTTTTGTTCCATTTACTGGGGTGAACCATCATGGTCAAATGATTTTGTTCGGTTGTGCACTTCTTTTGGATGATTCTGAGGCTTCTTTCTTGTGGCTCTTTAAGACATTTTTGACGGCAATGAATGACCGCCAACCTGTCTCTATAATTACAGATCAAAACAGAGCGACACAGACAACAGTTTCTCAAGTTTTTCCTCAAACACGCCACTGTATAAGTAAGTGGCATGTCTTGAGAGAAGGCCAAGAAAAGTTGGCACATGTTTGTCATGCTCATCCAAACTTTCAGGTTGAACTTTATAATTGTATTAACCTAACAGAGACCATTGAGGAATTTGAGTCATCTTGGAGTTCTATCCTTGATAAATATGAGCTCAGAAGAAATGATTGGCTTCGGTCATTGTATAACTCCCGTGCTCAGTGGGTTCCGGCATATTTTCATGATTCATTTTTCGCTGCAATATCTCCTAGTAGAGGATTTGACAGTTCTTTTTTTGACGGTTATGTCAACCAGCAGACAACATTACCGATGTTCTTTAGGGAGTATGAAAGGGCTTTAGAGAACTGGTTTGAGAAGGAAATAGAAGCAGATTTTGAAACTATTTGCACCACGCCAGTTTTGAGGACACCTTCACCCATGGAAAAACAGGCTGCTAGTCTTTATACAAGAAAAATATTTTCTTTGTTTCAAGAAGAGCTAGTTGAAACATTTGTTTATACTGCCAATAGAATTGAAGGTGATGAGGTAAATAGCACATTCAGAGTTGCAAAATTTGAAGATGATCAAAAGGCATATGTTGTCACATTAAACCATTCGGAGTTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCAGGCATTCTTTGCAGGCATGTCTTAACCGTATTCACAGTGACTAACGTGCTTACATTACCACCCCATTACATCTTAAGACGGTGGACAAGAAATGCAAAAAATGGTGTTGGATCAGATGAACGTGCTGGTGACTTACATGGACAGGAGTCTCTAACATCAAGGTATAGCAATCTATGTAGGGAAGCAATCAGATATGCTGAGGAAGGGGCAGTAGCTGTAGAAACATATAATGCTGCTTTGACTGCCCTTAAAGAAGGTGGGAAGAAGATTGCTGTTGTGAAGAAAAGTGTTTCCAAAGTTGCTCCTCCTAGCAATCAGACTGGTGGGATTGCTTATGATGACAAAAAAATTTCTACGTCAACTTCAGATGCAACCCCTCTTCTATGGCCACAGCATGATGAAATAATGAGGAGGTTTAATCTTAATGATGCTGGTGCTCCTGTTCAATCAGTTGCTGATCTAAATTTGCCACGAATGGCTCCTGTGTCCCTTCAGCGAGATGATGGTCCATCTGACAGCATGGTATGTAGAAAGGTGGTTCTCCCCTGTCTGAAATCAATGACTTGGGTAATGGAGAACAAAAATTCATCTCCTGGGAATAGAGTAGCTGTTATCAATTTGAAGCTGCAAGATTACAGCAGGACTCCATCAGCAGAATCTGAAGTGAAGTTCCAGCTCTCAAGAGTTTCTTTGGAACCAATGTTGAGGTCTATGGCCTACATCAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAGTCTGAAGTGAAGTTTCAGGTGTCCAGGGACACATTGGATGCCATGCTACGATCAATGGCTTATATTCGTGAGCAACTCTCTCATGCTGGAGACACGCAGTCAGAGCCTGTATGGAAAAGGCAACGAAAATAA 2652 0.4106 MDVQVINVEEGTGHQAMTDDGDAEPSEGEVNNAANSGSHVEDGIPEPFVGMEFDSEDAVRTFYNEYAKRVGFTTKVGQYGRSKVDGAIMYREYVCGKEGLKRRLGDSCDAMIKVELKGQNKWVITKFVKQHSHSMANPNKVHHLRPRKHFSSVGKTMPETYQGVGLVPSGVMYVSMDGNCVSNENIREAKNTPLEPSHVARNSTMMNNTGRPPIRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENRMSNVFWADARSRTAYSHFGDAVTLDTTYKVNQYKVPFVPFTGVNHHGQMILFGCALLLDDSEASFLWLFKTFLTAMNDRQPVSIITDQNRATQTTVSQVFPQTRHCISKWHVLREGQEKLAHVCHAHPNFQVELYNCINLTETIEEFESSWSSILDKYELRRNDWLRSLYNSRAQWVPAYFHDSFFAAISPSRGFDSSFFDGYVNQQTTLPMFFREYERALENWFEKEIEADFETICTTPVLRTPSPMEKQAASLYTRKIFSLFQEELVETFVYTANRIEGDEVNSTFRVAKFEDDQKAYVVTLNHSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPPHYILRRWTRNAKNGVGSDERAGDLHGQESLTSRYSNLCREAIRYAEEGAVAVETYNAALTALKEGGKKIAVVKKSVSKVAPPSNQTGGIAYDDKKISTSTSDATPLLWPQHDEIMRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPSDSMVCRKVVLPCLKSMTWVMENKNSSPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLRSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLDAMLRSMAYIREQLSHAGDTQSEPVWKRQRK 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2045 883 Pfam FAR1 DNA-binding domain 61 135 IPR004330 -
Lele25g2045 883 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 662 IPR031052 GO:0006355
Lele25g2045 883 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Lele25g2045 883 SMART 26again6 562 589 IPR006564 GO:0008270
Lele25g2045 883 Pfam MULE transposase domain 273 364 IPR018289 -
Lele25g2045 883 MobiDBLite consensus disorder prediction 1 41 - -
Lele25g2045 883 Pfam SWIM zinc finger 551 585 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2045 Lele-ChrLele25 27799389 27803838 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele25g2045 MULE 1.5e-24 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g2045 25 27799389 27803838 Lele26g2098 26 24019228 24021466 ECH
Lele25g2045 25 27799389 27803838 Lele25g2045 25 27799389 27803838 ECH
Lele25g2045 25 27799389 27803838 Lele27g0034 27 263503 265770 hybridization
Lele25g2045 25 27799389 27803838 Lele28g2097 28 23889099 23891256 hybridization