Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2032 ATGGAGTTATTTGCTGTTTATGCTAGTGTGAGTCTATTTGCTTTGCTTTGTGTCACAAGCGAAGCGAATCAGCAGGCAGAAAGGCTTCAAGAACATAGAGCAGCCGAGAGATATTCAAATAATAGCGAAGTTGATCATCAGATAAATTCATGGTGGGACGAGGAAGAAGATGAAGTGTCCAAAGAGCAATATCATGTTTCATTAGAAGAACAAGAGGGATTAAGGAAGGCTGATAAGATTAGTTCATTGCCTGGACAGCCTCGTGGGGTCAATTTTGATCAATATTCAGGTTATGTCACTGTTGATCCAAAAGCTGGTAGAGCACTTTTCTATTATTTTGTGGAGTCTCCATATAACCCTTCAACGAAACCTCTAGTGTTGTGGCTCAATGGAGGACCAGGTTGTTCTTCACTTGGCTATGGGGCCATGGAGGAATTGGGACCCTTCAGAGTCAACTCTGACGGAAAAACACTGTTTGATAATAAATATGCTTGGAACACAGTGGCAAACGTGTTGTTCTTGGAATCACCAGCAGGAGTAGGGTTTTCGTACTCAAACACTTCATCGGATTATGATGAAACAGGCAATAAGTTTACAGCGAATGATTCATATGTGTTCCTCATCAATTGGCTTGAGAGATTCCCACAATACAAATCCAGATATTTCTTCATCACTGGAGAGAGCTATGCTGGCCACTACGTGCCTCAGCTTGCTCGAACCATTTTAATCCACAACAAACAAAAACCCAGAACCATTATCAACCTCAAAGGCATTGCAATAGGGAATCCATGGAGTTGGGTTGATGATGAAACAAGTAACAAGGGGGTGTATGATTACTTCTGGACGCATGCTATGATCTCTGATGAAACCCATGAAGCTATTGATAAGCACTGTGACAACTTTGCTTCTGAAAGTGTTTCAGAAGAGTGTGTGAACTCCACAAATAAAGCATACGAGGAGATCGGGAACATAGATTGGTATAACATTTATGCTCCAATCTGTCACGACTTTTCGATCAGAGATAATGGCCCACCAGGTTCTGTATATAATTATGATCCATGCTCTGAGACTTATGTGAAAGTCTACTTGAATAACCCAGAGGTTCAGCGAGCTCTGCATGCACTCCCCACAAATTGGACTCATTGCAGGAATTATAAATGGATAGACAGCCCAAGTAGCATCCTGCCCACAACCAAGTATGTCATCGCAAGTGGCATTAGATTCTGGATTTACAGTGGGGACACAGATGGAAATGTGCCAGTCACCTCGTCAAGGTACTCCATCAACAAGCTCCACCTTCCTGTCCAGGTTCCTTGGCGTCCATGGTATTCTGGAAATGAGGTAGGAGGATATGTGGAGGAATACAAAGGACTAACATTTGTGACAGTGAGAGGATCAGGGCATGAAGTTCCGAGTTGGCAACCTGCGAGGGCTCTCACTCTTTTCACTTCTTTCCTTAACCACTCTCCCTCCTTCCCCCTTTGCATAATCCTTTTCTAA 1500 0.4307 MELFAVYASVSLFALLCVTSEANQQAERLQEHRAAERYSNNSEVDHQINSWWDEEEDEVSKEQYHVSLEEQEGLRKADKISSLPGQPRGVNFDQYSGYVTVDPKAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLFDNKYAWNTVANVLFLESPAGVGFSYSNTSSDYDETGNKFTANDSYVFLINWLERFPQYKSRYFFITGESYAGHYVPQLARTILIHNKQKPRTIINLKGIAIGNPWSWVDDETSNKGVYDYFWTHAMISDETHEAIDKHCDNFASESVSEECVNSTNKAYEEIGNIDWYNIYAPICHDFSIRDNGPPGSVYNYDPCSETYVKVYLNNPEVQRALHALPTNWTHCRNYKWIDSPSSILPTTKYVIASGIRFWIYSGDTDGNVPVTSSRYSINKLHLPVQVPWRPWYSGNEVGGYVEEYKGLTFVTVRGSGHEVPSWQPARALTLFTSFLNHSPSFPLCIILF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2032 499 FunFam Carboxypeptidase 350 491 - -
Lele25g2032 499 SUPERFAMILY alpha/beta-Hydrolases 77 490 IPR029058 -
Lele25g2032 499 FunFam Carboxypeptidase 74 336 - -
Lele25g2032 499 Pfam Serine carboxypeptidase 84 487 IPR001563 GO:0004185|GO:0006508
Lele25g2032 499 ProSitePatterns Serine carboxypeptidases, histidine active site. 458 475 IPR033124 GO:0004185
Lele25g2032 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Lele25g2032 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Lele25g2032 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Lele25g2032 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Lele25g2032 499 Gene3D - 354 385 - -
Lele25g2032 499 Gene3D alpha/beta hydrolase 75 336 IPR029058 -
Lele25g2032 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 79 475 IPR001563 GO:0004185|GO:0006508
Lele25g2032 499 FunFam Carboxypeptidase 394 488 - -
Lele25g2032 499 Gene3D - 394 487 - -
Lele25g2032 499 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2032 Lele-ChrLele25 27718688 27721236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g2032 359 490 Calmodulin-binding Proteins AT2G22960 29.927 1.11e-12 64.7