LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele25g2029	ATGAGCTGGGAAACAGTAGTGTACCATCTCATTTCCAATAACGTGCCAGGTTTTGTTCTTTGCACCTTGCCTTTTATTTCCCTGCTTTTCCTCTTCATTATAGATTTTCACCAGAGTCTTTTGTTTTTCTTGAATCTTTCTGTCAATCCAATGGAATCCGGATTTGGGTTTCTTGTTCTCTTCTCTGTCTTTACGTTGGCTTCCATGTTTGTCAGCGCCAAATCACAGTGTAGCGAGACTTGTGATTTCGCTCTTGGTTCGTACTATGTTTGGAATGGTTCAAACCTCACTTACATTTCGAAGGTTATGAAATCCCAGCTCGTTTCAACCCCAGACGATATTGTCAGCTACAACAAAGACAAAATACCCAATCAAGACAGCGTTTCGGCATTCATAAGAGTCAACGTTCCCTTCCCATGTGAGTGCATCAATGGCGAATTTTTAGGCCACACGTTTCAATATGATGTTCAGTCAGGGGACACCTACGAGAAGGTTGCTGTCACAAACTATGCCAATTTGACCACTGTTGATTGGCTGCAGAAGTTCAATAGCTACCCATCCGACAATATTCCTGACACTGGAACCTTAAATGTCACGATTAACTGTTCCTGCGGGAATAGAGACGTCTCTAAGGATTATGGGTTGTTCATCACGTACCCACTTAGGCCTGGGGAGACCTTGCAGTCAGTGGCAAGCGATGTGGGTCTTGACACCGGACTACTGCAGAGGTACAACCCGTCTGTGAATTTTAACCAAGGAAGTGGTCTGGTTTTTATTCCGGGCAAAGATCAAAATGGTACCTATGTGTCGCTTCGGTCAAGAAAAGCTGGAGGTCTTTCCACTGGGGCTATAGTTGGAATATCCATTGGAGTAGTAGCAGGGCTTCTTCTACTGGCAGTTGGTATATATATTGGCTATTTTAGAAAGAGTAAGACGGATGAGGTGAAATTACTCTCCCAAGAGTACAAAGGTCTCTCTTCTCAGGATAGGAGGGAGACAACCTCCGGTAATGTTGAAAATGGAACTTCTGGATCTGGTGGTCCTGTTGCTCCTATTGCTGGCCTTGCTGGCATTACAGTGGATAAGTCAGTGGAGTTTTTATATGAAGAGCTTGCTACTGCGACAAACAACTTCAATATGGCTAACATTATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCAGCAATCAAGAAGATGGATATGCAGGCAACAAGAGAATTTCTGGCTGAATTGAAAGTCCTGACAAATGTTCATCACCTTAATTTGGTGCGTTTAATCGGCTATTGCGTTGAGGAATCTCTTTTCCTTGTCTATGAGTACATTGAGAATGGAAACTTAAGTCAGCGTCTCCGAAGTTCAGGAAGAGATCCACTGCCTTGGTCTACCAGGGTGCAAATTGCTCTGGATTCAGCAAGAGGTCTTGAATACATTCATGAGCATACAGTGCCTGTATATATCCATCGTGACATAAAGTCGGCTAATATATTAATAGACAAAAACTTCCGTGGCAAGGTTGCAGATTTTGGATTGGCTAAACTTACTGAAGTTGGCAGCGGGACACTTCCCACTGGTCGTCTTGTGGGTACATTTGGATATATGCCACCAGAATATGCTCAATATGGGGATGTTTCTCCCAAAATAGATGTCTATGCTTTTGGAGTAGTTCTCTATGAACTTATTTCTGCTAAGGAAGCTATCATCAAGATAAATGAATCAATCACAGACTCAAAGGGCATCGTATCTTTGTTTGATGGAGTTCTTAATCAGCCAAATGCAATCGAAGATCTTCGCAAATTGGTGGACCCAAGACTTGGGGATGACTACCCTATCGATTCAGTTCACAAGGTTACTCAACTTGCCAATGCATGCACACAGGACAATCCCCAACTGCGTCCAAGCATGAGATCTATAGTTGTTGCTCTTATGACACTTTCTTCTGCCACTGAGGATTGGGATGTTGGCTCCTTTTATCAAAATCCAGCTCTTATGAATCTCATGTCTGGAAGATAA	2034	0.4312	MSWETVVYHLISNNVPGFVLCTLPFISLLFLFIIDFHQSLLFFLNLSVNPMESGFGFLVLFSVFTLASMFVSAKSQCSETCDFALGSYYVWNGSNLTYISKVMKSQLVSTPDDIVSYNKDKIPNQDSVSAFIRVNVPFPCECINGEFLGHTFQYDVQSGDTYEKVAVTNYANLTTVDWLQKFNSYPSDNIPDTGTLNVTINCSCGNRDVSKDYGLFITYPLRPGETLQSVASDVGLDTGLLQRYNPSVNFNQGSGLVFIPGKDQNGTYVSLRSRKAGGLSTGAIVGISIGVVAGLLLLAVGIYIGYFRKSKTDEVKLLSQEYKGLSSQDRRETTSGNVENGTSGSGGPVAPIAGLAGITVDKSVEFLYEELATATNNFNMANIIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCVEESLFLVYEYIENGNLSQRLRSSGRDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLAKLTEVGSGTLPTGRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAIIKINESITDSKGIVSLFDGVLNQPNAIEDLRKLVDPRLGDDYPIDSVHKVTQLANACTQDNPQLRPSMRSIVVALMTLSSATEDWDVGSFYQNPALMNLMSGR	677

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele25g2029	677	Gene3D	Phosphorylase Kinase; domain 1	359	448	-	-
	Lele25g2029	677	SMART	serkin_6	378	651	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele25g2029	677	MobiDBLite	consensus disorder prediction	326	344	-	-
	Lele25g2029	677	MobiDBLite	consensus disorder prediction	326	346	-	-
	Lele25g2029	677	SUPERFAMILY	Protein kinase-like (PK-like)	362	649	IPR011009	-
	Lele25g2029	677	Gene3D	Transferase(Phosphotransferase) domain 1	449	664	-	-
	Lele25g2029	677	PANTHER	CHITIN ELICITOR RECEPTOR KINASE 1-RELATED	60	663	IPR044812	GO:0019199\|GO:0045087
	Lele25g2029	677	ProSitePatterns	Protein kinases ATP-binding region signature.	384	406	IPR017441	GO:0005524
	Lele25g2029	677	ProSiteProfiles	Protein kinase domain profile.	378	652	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele25g2029	677	Pfam	Protein tyrosine and serine/threonine kinase	380	648	IPR001245	GO:0004672\|GO:0006468
	Lele25g2029	677	FunFam	PTI1-like tyrosine-protein kinase 3	449	663	-	-
	Lele25g2029	677	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	493	505	IPR008271	GO:0004672\|GO:0006468
	Lele25g2029	677	FunFam	LysM receptor kinase 2	357	448	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele25g2029	Lele-ChrLele25	27696722	27704036	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele25g2029	63	677	Receptor kinase-like Gene Family	AT3G21630	58.065	0.0	711

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Lele25g2029		PK_Tyr_Ser-Thr	2e-45	CL0016