Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2023 ATGTCGGATGACATGCTTGTGCATTTCTCTTCCAATTCATCCAACCAATCGGATCAGTCCTTGCCTACCAAGATTGCAAAGCTTGAAGCTCGAATGGTCGGCAAGGCTTCGCCCGCAGTTGCCACCACTCCGTCATCTGTTCAGCAGTCAACTTGGTCTTCTGTTCCTTCAGCTGCGAAATTTGGGGGACCTGCCGAGGATCTGGCTGGACCCTCCACCTCGAGTGATTCCGATGATGATAACGGTGGGGAATTCCTTATACAAGCTAACACACAGAAGCGCCAAAAACTTCCAAAAGATGACCACTCAAAGATTTTTGAACATGTTGAGGTAGTTACCGATGGAAGGCAGACTAGTTTGGATGCTGTGGAGGCAAAAGTTAGTGCTGATGTGAATAGGAAAAAAAATGGTCGTGGAAGAGGGAGTTCTGGTACTGGTAGGGGACGTGGTTCCAGAGTTACCGATCAGACCAGAACACAAATTTCTCCTCCAGCAGTTTTGGCCTCCAATGGTCAGCTTGACAATGCATGCCATAGGGAGGGAAGACTCAAAGATCAGATTCGCAGTGACAATGGCACCTCATTAGAGGAGGAGAATGCGTCTTTGCGTGCAAAATTTGTTGCATTGGAGGAGGACCTGCGGAAATCGAAACAAGAGATGTCCGATTATCAGAACCTTTGTCGCCAATTAGAAAAGGAACTAAAGGACCTGAAAGATCACGAACAGCAAATGAAGCCCAAGAGGACAAAAATAATATCTGATTTGCTTATATCAGTTTCAAAGTCTGAGAGGCAAGAAGCACGGTTGAAAGTACGGCAAGACTCATTGAGACTGGGGAATGTTGGTGTAGTAAGAGCGGGAACTGTCATATCTGAGACTTGGGAAGATGGGCAAGCATTGAAGGATCTTAATGCCCAACTTAAACAACTCATAGAAACGAAAGAGGCTATTGAGCGGCAACGCAAGTTATTGAAGAAAAAACAATCTGATAAAGGTGAGGGAACAGATGCAGATACTGGATTACAAGACGACGATGTCATCATTCAAGATGAAATCTATAAGTCTCGACTAGCTAGCATTAAACGTGAAGAAGAAGTTATCATGCGGGAGAGGGATCGCTATGAACTAGAAAAGGGAAGACTGATACGTGAGATGAAACGCATACGAGATGAGGATGGTTCACGTTTTAACAACTTTCAGATTCTGAACCATCGATATGCCTTGTTAAATCTTCTTGGAAAGGGGGGATTCAGCGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGTAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATTCGGCATGCAATTCGGGAGTATAATATCCACAAGACCTTGGTACACCATCACATTGTTCGTTTGTGGGACATCTTTGAGATAGATCACAATACATTCTGCACCGTTTTAGAGTACTGTAGTGGGAAGGATCTCGATGCTGTCCTTAAGGCAACACCTGTATTGCCTGAGAGAGAGGCAAGGGTAATTCTAGTTCAGGTTTTTCAAGGCCTTGTTTACCTGAATAAAAGAACGCAGAAGATTATTCATTATGATTTGAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGCATTGCCAAAGTGACTGATTTTGGTCTCAGCAAAATAGTTGAGGATGATGTGGGATCCCAGGGTATGGAACTAACATCTCAAGGGGCTGGAACTTACTGGTATTTGCCACCAGAATGCTTTGAGCTCAGTAAGACACCTCTTATATCATCGAAGGTTGATGTCTGGTCTGCCGGTGTTTTGTTCTATCAAATGCTCTTTGGAAGACGTCCATTTGGCCACGACCAAACTCAAGAGCGTATACTACGAGAAGATACAATTATTAAGGCTCGTAAGGTTGAATTCCCTTCTAGACCTACGGTTTCTAATGAGGCCAAGGATTTTATACGGCGATGTCTGACATATGACCAGGCCGAGCGACCAGATGTATTGAGCATTGCTCAAGACCCATATCTTACCTACTCAAAGAAGTAA 2055 0.4394 MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASPAVATTPSSVQQSTWSSVPSAAKFGGPAEDLAGPSTSSDSDDDNGGEFLIQANTQKRQKLPKDDHSKIFEHVEVVTDGRQTSLDAVEAKVSADVNRKKNGRGRGSSGTGRGRGSRVTDQTRTQISPPAVLASNGQLDNACHREGRLKDQIRSDNGTSLEEENASLRAKFVALEEDLRKSKQEMSDYQNLCRQLEKELKDLKDHEQQMKPKRTKIISDLLISVSKSERQEARLKVRQDSLRLGNVGVVRAGTVISETWEDGQALKDLNAQLKQLIETKEAIERQRKLLKKKQSDKGEGTDADTGLQDDDVIIQDEIYKSRLASIKREEEVIMRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKATPVLPEREARVILVQVFQGLVYLNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGVLFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPTVSNEAKDFIRRCLTYDQAERPDVLSIAQDPYLTYSKK 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2023 684 Coils Coil 300 330 - -
Lele25g2023 684 SMART serkin_6 406 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g2023 684 ProSitePatterns Protein kinases ATP-binding region signature. 412 435 IPR017441 GO:0005524
Lele25g2023 684 Pfam Protein kinase domain 407 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g2023 684 CDD STKc_TLK 405 678 - -
Lele25g2023 684 MobiDBLite consensus disorder prediction 1 23 - -
Lele25g2023 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Lele25g2023 684 MobiDBLite consensus disorder prediction 124 160 - -
Lele25g2023 684 SUPERFAMILY Protein kinase-like (PK-like) 398 680 IPR011009 -
Lele25g2023 684 Gene3D Transferase(Phosphotransferase) domain 1 397 684 - -
Lele25g2023 684 MobiDBLite consensus disorder prediction 39 57 - -
Lele25g2023 684 MobiDBLite consensus disorder prediction 1 84 - -
Lele25g2023 684 ProSiteProfiles Protein kinase domain profile. 406 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g2023 684 MobiDBLite consensus disorder prediction 70 84 - -
Lele25g2023 684 Coils Coil 192 243 - -
Lele25g2023 684 PANTHER MIXED LINEAGE PROTEIN KINASE 11 683 - -
Lele25g2023 684 Coils Coil 357 391 - -
Lele25g2023 684 FunFam Serine/threonine-protein kinase TOUSLED 397 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2023 Lele-ChrLele25 27643513 27650120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g2023 389 684 MAP Kinase Kinase Kinase AT3G13530 28.094 1.79e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Lele25g2023 Pkinase 8.3e-60 CL0016