Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2009 ATGTCCGCTTCAGAGCGCAACAATTCGTGGACCTTCGACGCTGACCTCGACGGCATCGACCTTGACCCCTCCGATTTCGGCTCCTCCATCCCACTCAAGAAGGTCACCAACGGCGACGTTTTCGCGGCCTCTCGCGCCGGCGACGTTGATCGCCTCTGGCACCTCCTCGAGTCCGGAGTCAACGTCAATGCTCGGGACCAGTGGGATTCTGTCGCTCTCTACTATGCTTGCCTTGCTGGTCACCTCGATGCTGCTCGCATGTTGCTCGAGAGTGGTGCAATCTGCTCTGAGCACACATTTGACGGTGACCGTTGCCACTACGCCGCCCTTAATTTGAAAGTCAGGAAGTTGTTGAAGGCATTTGAGGCAAGACCGCCGCCTCTGGGTCCCTTGCAGGCGGCGCTGAGAGATACTTTCTTGGGTTGTGCAGCTAATAGGGCCTACTTGGAGCTTGCTGATTCTCAATTTCAAATTTCGGGTATATCATCAGCTCAGGGATTTTATTGCAACCACTTTCCTCCGGATGTGGCTTTCTATGTATCAGGAAGACCTATTGAGGCTCACAGAGTCATATTAAGTGCGAGGTCACCATTTTTCAAGAAAAAGTTTGAGAGTGATTGGAAAGAGCGCAGGGAAGTAAGATTCTCTAAGGAGAAGTTGTCCTTTCCTGCTCTCTATAGCCTCTTGCACTTCTTTTATTGTGACAGATTAGAGATTGGTGTAGATGACATGGAAGATCTTGTGAGAATCTGTAAAGTATGCAAATGCGGATCACTACAGACAATTCTGGAGAAAGAACTAATTCATCAAAAATATGCAGAGTATAAAGCGCTGAGAGATTTGGACAATTCTCAAAAGCGGTTCATTTTACAGGGTTTATTCCTTCCTGAAGAGGACAGGCTTCCTGCAGCCTTGCATCGAATCCTTTGTATTTCCCTTTCAAATTCAACTAAAGAAAATGTTCTAGATGGTGGAATTGATAAATTGGCCCTTGGGGTGGGTGCAATGCAGATTGCTAATTCTATGGATGATCTTGCAGATGTTTGTATAAGAGTTGATAAAAAAGTTTTCCGCTGCCATCAAGTTATTTTAGCATCAAGGTCAGAATACTTCAAAGCAAGATTGTCACGTATACAGGACTTCCATGAAGGGAAGTCATCTGTTTATTCCCTTCCTTGTCTTGAAGAACGTGATTTGAGCAAGGAATCATTTGAGAAAATGATTGAGTATATGTACACTGATGGTCTGAAGCACATTGATCCGGATCAGGCAGAGGAAATGTTTGATGCTGCTTCCAGATATTTATTGTTTCCTCTAAAGCGTGCTGTGGCTGATGCCCTGCTGCCGCACTTGGAAATGGTTTCACCTGCAGAACTTTGCCATTGGTTGATCCTGGCAGACATGTATGGTGTCTTGAAGATACGGGAATATTGTTTAGATACCATAGCTTGTAATTTTGAAACATTTGCGGATACTAAAGAATTCCGAGCAATGCTATTGACGCTGCCGCCACCATCCGGAGATACCTCTCTACGTACCACTGCCCCAAGTGTTCCCGGAGCTGCTCTGAACACCGATCAAGGGAATCTTCTTGATGATTTACGAGAGAAATGGCTTGAAATTGAAGCTGCCGAGCTTGATGAGAGAGATGAGAGCGCATTGCAGTTTGACAAGCGCCTAGAGATGCTTATGCTTGTTGCAGAGCAAGAAAAAATAGGCAATACTGAATCAGATGATATTGAGAATGTGGCATCCTCAGCTCTTTCTGAAACCTCTATTCAAATTTCTACTGAACAAGAACTGTAG 1806 0.4535 MSASERNNSWTFDADLDGIDLDPSDFGSSIPLKKVTNGDVFAASRAGDVDRLWHLLESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQAALRDTFLGCAANRAYLELADSQFQISGISSAQGFYCNHFPPDVAFYVSGRPIEAHRVILSARSPFFKKKFESDWKERREVRFSKEKLSFPALYSLLHFFYCDRLEIGVDDMEDLVRICKVCKCGSLQTILEKELIHQKYAEYKALRDLDNSQKRFILQGLFLPEEDRLPAALHRILCISLSNSTKENVLDGGIDKLALGVGAMQIANSMDDLADVCIRVDKKVFRCHQVILASRSEYFKARLSRIQDFHEGKSSVYSLPCLEERDLSKESFEKMIEYMYTDGLKHIDPDQAEEMFDAASRYLLFPLKRAVADALLPHLEMVSPAELCHWLILADMYGVLKIREYCLDTIACNFETFADTKEFRAMLLTLPPPSGDTSLRTTAPSVPGAALNTDQGNLLDDLREKWLEIEAAELDERDESALQFDKRLEMLMLVAEQEKIGNTESDDIENVASSALSETSIQISTEQEL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2009 601 CDD BACK 460 498 - -
Lele25g2009 601 FunFam BTB/POZ domain-containing protein 168 290 - -
Lele25g2009 601 Gene3D Potassium Channel Kv1.1; Chain A 338 493 IPR011333 -
Lele25g2009 601 ProSiteProfiles BTB domain profile. 346 420 IPR000210 GO:0005515
Lele25g2009 601 Gene3D Potassium Channel Kv1.1; Chain A 161 289 IPR011333 -
Lele25g2009 601 SUPERFAMILY POZ domain 160 269 IPR011333 -
Lele25g2009 601 ProSiteProfiles BTB domain profile. 174 241 IPR000210 GO:0005515
Lele25g2009 601 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 12 567 IPR044515 -
Lele25g2009 601 FunFam BTB/POZ domain-containing protein 34 157 - -
Lele25g2009 601 CDD BTB_POZ_ZBTB_KLHL-like 345 434 - -
Lele25g2009 601 Pfam BTB/POZ domain 344 447 IPR000210 GO:0005515
Lele25g2009 601 Pfam BTB/POZ domain 170 270 IPR000210 GO:0005515
Lele25g2009 601 SMART BTB_4 346 451 IPR000210 GO:0005515
Lele25g2009 601 SMART BTB_4 174 271 IPR000210 GO:0005515
Lele25g2009 601 SUPERFAMILY POZ domain 341 450 IPR011333 -
Lele25g2009 601 SUPERFAMILY Ankyrin repeat 42 118 IPR036770 -
Lele25g2009 601 Gene3D - 24 159 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2009 Lele-ChrLele25 27554998 27563088 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele25g2009 BTB 1.2e-14 CL0033