Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g2005 ATGCAAATATGTTTAACCAATTCAGCCTTCAGGACCCCTTCAATTTTCCCATTTCATCTATCCATTTCAACGCAAAAGCCATTGAGCCACCATATTCCAGTGCAGACCCACTTGAATGCTGCCAAAAGATCGGAATATTTATCCGAAATCAGCAAAGCAATCGATCAAGAAGAACAGTACCGCATAGCTCGGTCTCAGGTTCTGCGCAAAGGTGTCGACTTGGAAGGTTACTCGATTGAGGGGCTTTCTATTGGTGGACAAGAGACCTGTGTAATAATTCCCGATTTCAAGTGTGCTTTCGATATAGGGAAGTGCCCTACTAGGGCTATTCAACAAAACTTCGTTTTCATTACTCATGCTCATCTTGATCACATTGGAGGGCTGCCAATGTATGTAGCTAGCCGTGGTTTATACAATTTAAAGCCTCCCACTGTGTTCGTGCCTCCTTGCATCATGGAGGATGTTGAGAAGCTGATGGATATACACAGGACGATGGGCCAAGTTGAATTAAACCTTGAACTGGTTGCGTTGGACGTAGGGGAAACCTATGAGTTACGTAATGACCTTGTTGTTCGACCATTCAGAACCCAACATGTAATACCCAGCCAGGGCTATGTAGTGTATTCAGTCAGGAAAAAACTCAAGAAACAGTATATGCACCTTAAAGATAAAAGGAGTCAAATTGAAAAAAAGAAGAAGTCCGGTGTTGAGATTACAGACACTGTATTATCTCCAGAGGTGGCCTTCACCGGTGATACAACTGCAGATTTTATGCTTGATCCACGCAACGCAGATGCACTGAGAGCAAAAATTCTTATAACTGAGGCAACTTTCCTGGATGAGTCATTCAGCGTAGAACATGCTCGGCAACGCGGGCATACACATTTATCTGAGCTCATTGGAAATGCTCAGTGGATTCACAACAAAGCTGTTTTATTAACTCATTTTTCGTCAAGATATAAAATAGAGGACATTCGTCAAGCTGCATCAAAATTGCAGTCAAAACTATCTGCAAAAGTGGTTCCTCTCACCGAAGGTTTCAAATCAAAGGAAACAGTTGTGGTTTATATTATGAGGAAAAGGGAGAGGGAAAATCCTTGTGGGGTATGTGGCCACTATCACAAATACGAAGAAGGGGAAGTTTGTTCGATTTGTGGACACCGCATTCCGGCAGCATCGGAGAAAACTTCAATCCGAGTCAGCGCCTTTCCTTCCGTGATTTTGCCAGAATTCCTTTACTTGGGCAGTTATGATAACGCGTCACGGTCGGAGCTTCTCAAGACTCAGGGAATCTCTCGAATCCTCAATACGGTTCCTTCTTGTCAAAATCTCTACAGAAACTCATTTACCTATCACTGTCTTCCAGATGACAAAACTTTGCCATTTAATGAAGCGATTCAGTTTATAGAGGAATGTGAGAAGGACAAGGCCCGGGTTCTGGTTCATTGCATGTCAGGGAAGAATAGGTCCCCAGCAATTGTGATTGCTTACCTGATGAAGTCCAAGGGTTGGAGACTCCCCCAGAGCTACCAGTGGGTAAAAGAGAGGAGGCCTTCTGTAGAATTAACTGAAGGTGTTTACCAGCAACTGCAGGAGTATGAGCGCAAGATCTATGGATCGGTTGACACTGGCAGCTCTCCTTCGTTTCGGTTCTCAGCTCCAGCACCTCCTCCCATTAGCTTTGGCTACCCAAAAATTAATGATCCAGCAGCTCCTCTTCCTGCCTTCAGCAATCCTAGCGCTCCCTCAATCTTTGCCCAAGCTCCCTTAGATGTTCCCCCGACAGACTTTACTTTTGGAGCTGGCCAGACTCAAAGCAGTGTGATTGGGAGCCCATTTAATGCCAATCCACCAAATCGAACCGGCAGTGACACCCAAATGGACGGTTCTTGA 1893 0.4474 MQICLTNSAFRTPSIFPFHLSISTQKPLSHHIPVQTHLNAAKRSEYLSEISKAIDQEEQYRIARSQVLRKGVDLEGYSIEGLSIGGQETCVIIPDFKCAFDIGKCPTRAIQQNFVFITHAHLDHIGGLPMYVASRGLYNLKPPTVFVPPCIMEDVEKLMDIHRTMGQVELNLELVALDVGETYELRNDLVVRPFRTQHVIPSQGYVVYSVRKKLKKQYMHLKDKRSQIEKKKKSGVEITDTVLSPEVAFTGDTTADFMLDPRNADALRAKILITEATFLDESFSVEHARQRGHTHLSELIGNAQWIHNKAVLLTHFSSRYKIEDIRQAASKLQSKLSAKVVPLTEGFKSKETVVVYIMRKRERENPCGVCGHYHKYEEGEVCSICGHRIPAASEKTSIRVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYRNSFTYHCLPDDKTLPFNEAIQFIEECEKDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLPQSYQWVKERRPSVELTEGVYQQLQEYERKIYGSVDTGSSPSFRFSAPAPPPISFGYPKINDPAAPLPAFSNPSAPSIFAQAPLDVPPTDFTFGAGQTQSSVIGSPFNANPPNRTGSDTQMDGS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g2005 630 CDD DSP_plant_IBR5-like 404 533 - -
Lele25g2005 630 Pfam Beta-lactamase superfamily domain 113 316 IPR001279 -
Lele25g2005 630 Coils Coil 211 231 - -
Lele25g2005 630 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 460 528 IPR000387 GO:0016311|GO:0016791
Lele25g2005 630 Gene3D Protein tyrosine phosphatase superfamily 397 543 IPR029021 -
Lele25g2005 630 SMART dsp_5 403 536 IPR020422 GO:0006470|GO:0008138
Lele25g2005 630 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 404 538 IPR029021 -
Lele25g2005 630 ProSitePatterns Tyrosine specific protein phosphatases active site. 481 491 IPR016130 GO:0016311|GO:0016791
Lele25g2005 630 PANTHER TRNASE Z TRZ1 39 347 - -
Lele25g2005 630 SUPERFAMILY Metallo-hydrolase/oxidoreductase 94 333 IPR036866 -
Lele25g2005 630 FunFam Protein-tyrosine-phosphatase IBR5 393 543 - -
Lele25g2005 630 Pfam Dual specificity phosphatase, catalytic domain 412 535 IPR000340 GO:0008138|GO:0016311
Lele25g2005 630 ProSiteProfiles Dual specificity protein phosphatase domain profile. 403 539 IPR020422 GO:0006470|GO:0008138
Lele25g2005 630 CDD RNaseZ_MBL-fold 82 276 - -
Lele25g2005 630 MobiDBLite consensus disorder prediction 598 630 - -
Lele25g2005 630 SMART ptp_7 440 542 IPR003595 -
Lele25g2005 630 MobiDBLite consensus disorder prediction 595 630 - -
Lele25g2005 630 Gene3D - 77 349 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g2005 Lele-ChrLele25 27524135 27536067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g2005 358 523 Protein tyrosine phosphatase (PTP) family AT2G04550 73.964 1.62e-92 281