Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1996 ATGAAAGTGGAAGAACTCCAATTCGAGTTCGATCATCTCCACCACCAGCAGCGGCAGAGTAAAGAGAAGACCCATTTGGGTGCCGCCGAACTCTTGCCGCCCGTCGTCTCTACCGATGATGATTGTGGTAAGTTTGACAAGGTCATTGACGGCGAGGACGAGGATTGTTTCGTCCAGCCTATCAATTTCGCGATGGTAGATAATGGCATTTTCCGGTCCGGCTTCCCTCATACCGCCAACTTCTCCTTCCTCAAATCCCTCGGTCTCCGCTCCATCGTGTATTTCCTTCATCCGGTCTCTGCTGCCACTGAGCCTTTCTGTGTTGAATTTGTTCAAATGGTTTTTCAGATATCTCAGTCCCGAGCCGTATTCGGAGGAAAACTTAGAGTTCTTGAAGTCAAATGGGATCAAGCTTCATCAATTTGGGATTGA 432 0.4861 MKVEELQFEFDHLHHQQRQSKEKTHLGAAELLPPVVSTDDDCGKFDKVIDGEDEDCFVQPINFAMVDNGIFRSGFPHTANFSFLKSLGLRSIVYFLHPVSAATEPFCVEFVQMVFQISQSRAVFGGKLRVLEVKWDQASSIWD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1996 143 Pfam Tyrosine phosphatase family 58 107 IPR004861 -
Lele25g1996 143 PANTHER TYROSINE-PROTEIN PHOSPHATASE 36 110 - -
Lele25g1996 143 Gene3D Protein tyrosine phosphatase superfamily 56 122 IPR029021 -
Lele25g1996 143 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 57 102 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1996 Lele-ChrLele25 27436623 27437118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1996 47 95 Protein tyrosine phosphatase (PTP) family AT1G05000 65.306 1.88e-16 70.1