Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1957 ATGGAAGCAAGCAAAGAGGAGGCGCTTAAAGCAATAGAGATTGCTGAGAAGAGATTTGCTCAGAGAGACTTTGCAGGTGCCAAAAATTATGCATTAAAGGCAAAAGCAATATGTCCTGAATTGGAGGGCATACCTCAAATGGTGGCCACATTTCAAGTTTATGTAGCTTCTGATGCAAAATATAATGGCGAACTAGATTATTATTCAATTCTTGGAACAAAACCTTCATCAGATAAAGAGACAGTTAGGAAGCAGTATAGGAAGTTGGCTGTGTTGCTTCACCCGGATAAGAACAAATGTGTGGGAGCTGATGGGGCCTTTAAGCTGGTTTCTGAAGCATGGACTTGGCTATCAGATAGTGCTATGCGAAGTTCTTATGATCTCAAGAGAAATGCGCAATTGGCTGCTGGGGTCAATCAGACCAATTTGTCATCAGTCCATTCTGCAGGAACTACAGGTTATAACAAATGTTTCAATTTGCAAACTTCTCACGGTAGGCGTGATACTTTCTGGACTATTTGCACCTCATGTCAAGTCCAGTATGAGTATTTGCGTAAGTATATGAATAAGAGACTTTCATGTAAGAACTGTCGCGGAACTTTCATTGCCATTGAATCTGGGGCAGCCCCAGCAAATGGTTCTTTCCCTTATACTCCTTGGTCATATGTGCCAGGCAATGGATATGGTGGTCATTCATTTGATAACGTCACATATGTGCCTACCAGTACTACCTATTTCAATGGCAATGGGGTCACTGGATATCATTCTCCACATGGATATGAGTATGTTTCAAATGTTTCATTTCAGTGGAGCCCTGCTGGAAATGTCAACGGAAATGGTTCAACTACCCTATCTTCTGATTCTAGTTGTAAGGTCAATGGAAATAGGAAGAGAGGAAGACCAAGAATCAAATCAGCAGTTGATCAGAGGCATCAATTAGCAGGCATTGCGCCCAATGTAAGTTCAGATGTATCATTCTACTGTAATGAACCTCAGGAAAGTAAGGCCACTAGACCTGATAAAAAAAGGAAAATTGTTGTGGCAGCCAGTTTCCGAAATATCTGTGAACAAAAGGAATTGAAATTTGCTTCTGAATCAAGATTGGTTGATGGGAATGAAAGCATTGTGCATGGCCAGAAACTTTCCTGTGTGAGTGAAGTTCAAACTAAGCAGTGTTCCATGGCCCCTGCATTTGATGGGAGAAAATTACTGATTGAGAAGGCCAAGACAGACATTCAGAAGAAACTGGAAGAGATTAAATTGGCGTCTGACATTGCCGTTGTTGGGGAGAAAGCAAAATCTCAAGCAGAAGTTGGTCAAGTGAATGGAGGATACAGAGGAGCAGGTCTAAGTGTTTCTGACCATCAAGTAGAGCATAGGAAAACTGCTTCTGTCACAATAACCGTCCCAGATTCTGACTTTCATGACTTTGATAAAGACAGATCAGAGCAATGCTTCAGGCCGAAGCAAATATGGGCTTTATATGATGAGGAAGATGGCATGCCTCGTTTATATTGTCTAATCCGTGAGGTCATCTCTGTCAATCCATTTAAGATTTATATTAGTTATTTGAACTCCAAAACTGATAGTGAGTTTGGCCCAGTGAACTGGATAGATTCTGGTTTTACCAAATCTTGTGGAAATTTCAGGGCATATAATTCTGATTTTGTTGACCAGGTAAATATTTTCTCTCATGTTCTAACACGGGAGAAGGCTGGTCGAGGTGGTTGTATTCGCATATACCCCAGATGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCTCCAGAATGGAACAGGTTGACTCCACATGAAGTGAGGCATCGGTATGAAATGGTGGAGGTTCTTGATGATTACTCTGAGGAGCTTGGTGTTTGCGTCAGTCCCCTTATAAAGGTAGCTGGATTTAAAACAGTGTATCAAACAAATACAGACAAAAAAGCTGTTAGATGGATACCAAGAAGAGAAATGTTGCGCTTTTCACACCAAGTGCCTTCTTGGTTGCTGAAGGGAGAGACAAGCAATTTGCCAGAAAGGTGTTGGGATCTTGATCCGGCAGCAACTCCTGATGAACTTCTTCATGCTGCTACAATCACGAATGCTTTATAG 2109 0.4144 MEASKEEALKAIEIAEKRFAQRDFAGAKNYALKAKAICPELEGIPQMVATFQVYVASDAKYNGELDYYSILGTKPSSDKETVRKQYRKLAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSAMRSSYDLKRNAQLAAGVNQTNLSSVHSAGTTGYNKCFNLQTSHGRRDTFWTICTSCQVQYEYLRKYMNKRLSCKNCRGTFIAIESGAAPANGSFPYTPWSYVPGNGYGGHSFDNVTYVPTSTTYFNGNGVTGYHSPHGYEYVSNVSFQWSPAGNVNGNGSTTLSSDSSCKVNGNRKRGRPRIKSAVDQRHQLAGIAPNVSSDVSFYCNEPQESKATRPDKKRKIVVAASFRNICEQKELKFASESRLVDGNESIVHGQKLSCVSEVQTKQCSMAPAFDGRKLLIEKAKTDIQKKLEEIKLASDIAVVGEKAKSQAEVGQVNGGYRGAGLSVSDHQVEHRKTASVTITVPDSDFHDFDKDRSEQCFRPKQIWALYDEEDGMPRLYCLIREVISVNPFKIYISYLNSKTDSEFGPVNWIDSGFTKSCGNFRAYNSDFVDQVNIFSHVLTREKAGRGGCIRIYPRCGDIWAVYRNWSPEWNRLTPHEVRHRYEMVEVLDDYSEELGVCVSPLIKVAGFKTVYQTNTDKKAVRWIPRREMLRFSHQVPSWLLKGETSNLPERCWDLDPAATPDELLHAATITNAL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1957 702 CDD DnaJ 66 119 IPR001623 -
Lele25g1957 702 Pfam DnaJ domain 66 127 IPR001623 -
Lele25g1957 702 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele25g1957 702 SMART dnaj_3 65 122 IPR001623 -
Lele25g1957 702 Pfam Domain of unknown function (DUF3444) 466 672 IPR024593 -
Lele25g1957 702 Gene3D DnaJ domain 54 151 IPR036869 -
Lele25g1957 702 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele25g1957 702 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele25g1957 702 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele25g1957 702 Coils Coil 405 425 - -
Lele25g1957 702 PANTHER BNAC03G44070D PROTEIN 1 689 - -
Lele25g1957 702 SUPERFAMILY Chaperone J-domain 57 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1957 Lele-ChrLele25 27171842 27173950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1957 4 302 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.183 1.22e-29 119