Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1954 ATGTCTTCCTCTTCATCATCATCTCCTTCTTCTTCTTCCTCCTCTCACAACACTCCCACTAATCATCACCATAATGCTGGTGCTGCTGATCCTGGCCCTAGCTCATCATCAAGAACAATCGTCTCCGATTCCGACGAGCCCTCTTTGTCTCGGCCACGTCGTGCCATGAATGATGTCTGGCCTGATCCTTTTCTTGAAGACTTAACCATCCAAGTCGCCATTGATGCTTCTCTCTCTTCCGGTCGTCTTTCTGCCGCTCCGGCACTGGCCAACTTGTTTCAGGTTTGTTCGAGGTGGCAGGCTGTTTCAAGGTCGGATCGCCTGTGGCAGCGGTTCACCGGAGATATATGGCGGCGAGAAACTCTAACGCAAAACACTTGGTACGAAGAGTTCATTCGTTGGCATCGAATGGCCAGGAATTTTGCCGTTGGCAGATACGCTTATTCCTTGTTGCAGTTTGGCCCGTCGGACATGGATGACGACCACTACGCCACCGTCATCTGCCGCTGCCTCACCCTCTCCGATGGCTATCTCGCCTGCGGCTTCACCGACGGTACCGTCCGCCTTTTCCACCTCGATACTCGCGTCCACTTCAGTACATACCGGACCCACCAAGCCAACCGCTTAGGTCCCTTTGCGAGATCCGTGTCTGGCATCGTGATGGCCGACAGCAGGCTCGTCTTCGCCACGCTGGACGGGGACATCTACGTGGCACACCTCGACGAGCCCATCAATCACACACGTAGGGCCCGCATCGCTGACGTGGTCAACAGCGGAGTCCTCGTAGAGTTTGCTGGACGTGGCCGGTGGTGGGTGGGACTCTTCGCCGGAGTTCCTGGCCAGGCGTTTCAGATTTGGGACGCCGAAAACGAACAACTGGTGTTCATTGGCGGATCCTTGACTGACCCGGAAACCGTAATGGGTTGGCACATGTTGACGGAGTTTGTCGAACCGGTGGGTCGTCTTCGGGTCACGGACGGAGGCTTGGCGGTGGCGTGTACTAGCTCACAACTCATGGTGTTCGACCTGAACAACCAGATTCTATTGCATGAGCTCTGGTCCGCTGTGGGCGGCTTCATTGTGACATCGATGGACGTGAGCCATGAGGCGTTGTTTATCGTGGAAAGGAACGGCGACGCTAAGGTGCGCCATGTGAGAACGTTAGAGCAAATATGTGGATTCCGGACACGTCTGGTAAGGGGTTTGTTGGGGTGTAAGAATATGGGGTACGCGCTAACATGCGCCGGGGGTGTGGTGAGGGTGTGGGACGTTGAGCGACGGGGGGGCCGACGGCGTTTGGTGGTGGGAGAGAAGATGGGTGAGGTGATTGCCATGGCGTGCAACGAGAGACATGTGGCCATTTCTTGTAATGACAGGTCGATACACTTATGGGATTTCGATGTATAA 1407 0.5537 MSSSSSSSPSSSSSSHNTPTNHHHNAGAADPGPSSSSRTIVSDSDEPSLSRPRRAMNDVWPDPFLEDLTIQVAIDASLSSGRLSAAPALANLFQVCSRWQAVSRSDRLWQRFTGDIWRRETLTQNTWYEEFIRWHRMARNFAVGRYAYSLLQFGPSDMDDDHYATVICRCLTLSDGYLACGFTDGTVRLFHLDTRVHFSTYRTHQANRLGPFARSVSGIVMADSRLVFATLDGDIYVAHLDEPINHTRRARIADVVNSGVLVEFAGRGRWWVGLFAGVPGQAFQIWDAENEQLVFIGGSLTDPETVMGWHMLTEFVEPVGRLRVTDGGLAVACTSSQLMVFDLNNQILLHELWSAVGGFIVTSMDVSHEALFIVERNGDAKVRHVRTLEQICGFRTRLVRGLLGCKNMGYALTCAGGVVRVWDVERRGGRRRLVVGEKMGEVIAMACNERHVAISCNDRSIHLWDFDV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1954 468 PANTHER WD40 REPEAT PROTEIN 12, 37 16 426 - -
Lele25g1954 468 MobiDBLite consensus disorder prediction 1 56 - -
Lele25g1954 468 MobiDBLite consensus disorder prediction 1 46 - -
Lele25g1954 468 Gene3D - 158 468 IPR015943 GO:0005515
Lele25g1954 468 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 109 467 IPR011047 -
Lele25g1954 468 SUPERFAMILY F-box domain 87 136 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1954 Lele-ChrLele25 27130974 27136868 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Lele25g1954 None None None