Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1927 ATGGCATCGATACCACAAGTTATTACATGTAAAGCTGCTGTATGGCGGGGAGGCGGAGAAAATGATGTGAGGTTGGAAGACGTAGAAGTGGATCCTCCCAAATCAACCGAAGTTCGTGTGAATCTGCTCTGTGCCAGTATCTGCCACACCGACCTCTTCTGGGCCAGAGGACTTGCCCTCCCTTTGTTTCCTAGAGTATTAGGGCATGAAGGGGTTGGTGTTGTTGAGAGCATTGGGGACAAAGTAAGAGATCTAGAAGTAGGCGATGTTGTGATTCCAACATTTGTTGGTGAATGTCAAGAATGTGAGAACTGCATTTCAAGGGAAACCAACTTGTGCCTGAAATACCCCGTGAGAATAAGCGGCTTAATGATGGATAACACATCAAGGATGAGCATAAGGGATCAAAAGATATTCCATCTCTTTAGTTGTTCCACATTTGCAGAGTACACGGTAGTTGAAGAAAATTATCTTGTCAAAGTTGATCCCAACATTGACCCAGCCCATGCTAGCTTCATCTCTTGTGGGTTCTCAACTGGTTTTGGGGCTGTTTGGAAAGAAGCTAAGGTTGAAAGTGGATCATCCGTCGCTGTTTTTGGCCTTGGTGGTGTTGGTTTAGGGGCTATAAGTGCAGCCAAACTGATGGGGGCAACTAAGATAATTGGGATTGACAAAAATGAGATGAAGAAAGAGAAAGGAGAAGCTTTTGGAATGACAGATTTTATCAATCCTGATGCATCTGATAAATCAGTTTTAGAGTTGGTCAAGGAACTGAGTGGTGGAATGGGTGTGGATTATTCTTTTGAATGCACTGGAGTTGTCCCAGTGATTTCTCAAGCCCTGCAAGCCACAAAATTGGGGAAAGGAAAGACAATAGCCATTGGTTCAGTAAGTGAAGAATTTGTGCCCATCAACTTCCGTTCTCTTTTACTTGGGCGAACTTTAAAAGGTTCCCTTTTTGGAGGACTAAAACCCAAATCTGACCTCCCTTTCATTATTCACAAATGCCTCAAAAAGGAATTTCCTCTCGATGAACTCTTAACTCATGAGGTGTCATTGACAGAGATAGACAAAGCTTTGGAGCTATTAAAAGAACCAGATTGTGTCAAAGTTGTGATTAGGATTTAG 1128 0.4282 MASIPQVITCKAAVWRGGGENDVRLEDVEVDPPKSTEVRVNLLCASICHTDLFWARGLALPLFPRVLGHEGVGVVESIGDKVRDLEVGDVVIPTFVGECQECENCISRETNLCLKYPVRISGLMMDNTSRMSIRDQKIFHLFSCSTFAEYTVVEENYLVKVDPNIDPAHASFISCGFSTGFGAVWKEAKVESGSSVAVFGLGGVGLGAISAAKLMGATKIIGIDKNEMKKEKGEAFGMTDFINPDASDKSVLELVKELSGGMGVDYSFECTGVVPVISQALQATKLGKGKTIAIGSVSEEFVPINFRSLLLGRTLKGSLFGGLKPKSDLPFIIHKCLKKEFPLDELLTHEVSLTEIDKALELLKEPDCVKVVIRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1927 375 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Lele25g1927 375 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Lele25g1927 375 Gene3D - 20 370 - -
Lele25g1927 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Lele25g1927 375 SUPERFAMILY GroES-like 5 191 IPR011032 -
Lele25g1927 375 Pfam Zinc-binding dehydrogenase 203 322 IPR013149 -
Lele25g1927 375 Gene3D - 180 318 - -
Lele25g1927 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 337 IPR036291 -
Lele25g1927 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Lele25g1927 375 SUPERFAMILY GroES-like 326 374 IPR011032 -
Lele25g1927 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Lele25g1927 375 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1927 Lele-ChrLele25 26945806 26948025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1927 37 232 Monolignol Biosynthesis Gene Families AT4G37980 30.808 5.26e-14 70.1