Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1895 ATGTCAATCGATTTGTCGTTGCCGGCCGGTAATCGGAGTCAGAAGCCAACTGGCTCTGATATTCAGAGAGTTTCTTTGGCTTGCTACTATAGTATTCAAAGTCCCTCTCGCAAATATGGCCAAGCTATTGATTTATATACAAAAGCAATTGAACTGAACAGTCAAAATCCTGTTTACTGGGCCAACCGGGCCTTTGCACATCTTAGGCTTGAGGAATATGGTAGTGCAATACAAGATGCTTCGAAGGCCATTGAAGTTGATCCTAAATATTCAAAGGGTTATTACAGACGAGGTGCTGCTCATCTTGCCATGGGGAAATTCAAGGAAGCACTGAAGGATTTTCAGCAGGTCAAGAAACTGTGCCCAAATGATCCTGATGCAACAAAGAAATTAAAGGAATGTGAAAAGGCAGTTATGAAACTTAAATTTGAAGAAGCAATTTCTGCGCCAGATACTGAAAGGCGTTCAGTAGCTGAATCCATAGATTTCCGTACCATAGCTGTAGGGTTTTATTTTGTTGAAATGCCAGTTGCTTCATTTGAACCTAGCCTCTCATTAGTTTCTATCAGGCCAATGAAGAAAAATATCAATACTATGCAGCCATCCAACATAAAGCTTTCTTCTCCCTCCATAAAAAACCGTATCACAGCAAACCTTTTGCATCCGGAAGGATTGTATATTCCTTATTTCATGAAATCAAAAGGTTCGGGATTGGACAGGGCCTTTCTTTTGTTCTTTGGTTTGACATCAGTGGCCACAAGAGTAGCTGCAATTGTGGTTGGTCTGCTGTTGCTCCTTGGGGCATGTTGGTGGAGTAGCTACAATGCTGATGTGGAGCCACAATACTCAGGAGCAAGCATAGAGGGGGATTTTGTTACTTTGGATTTTGTGAAAAAAATGATGGATGATTTTAGGAATCAAAAATGCCTACATAAAAGGTATGCCTACCAAATTGTATTGCAAACAAGAGAGATGTTGTTATCCTTGCCTCCTCTTGTTGATATAAATGTTCCTGATGGCAAACATTTCACTGTTTGCGGTGATGTGCACGGTCAGTACTACGATCTCTTAAATATCTTTGAGCTTAATGGGCTTCCCTCTGAAGAGAATCCATACCTTTTTAATGGTGATTTTGTGGATAGAGGATCTTTTTCACTGGAAGTCATCCTTACTTTGTTTGCGTTCAAGTGCATGTCTCCATCAGCCATATATCTAGCTAGAGGGAATCATGAGAGCAAGAGTATGAACAAGATATATGGTTTCGAGGGTGAGGTCCGCTCGAAGTTAAGCGACACATTTGTGGAACTATTTGCAGAAGTCTTCTGCTGTTTACCTTTGGCTCATGTGATAAACGGGAAGGTTTTTGTGGTTCATGGAGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTGACATTAGAGCAATTAACCGATTTTGATTAATGTGTGAATTGCTATGGAGTGATCCACAACCTCCTCCTGGACGGGGCCCAAGCAAGCGTGGTGTAGGTCTTTCTTTTGGTCCAGATGTGACAAAAAGCTTTTTGCAGGAAAATAATTTAGAGTTAGTTGTCAGATCTCATGAAGTAAAGGATGATGGTTATGAGATTGAACATGATGGTAAACTCATAACTGTATTCTCTGCTCCAAATTACTGTGACCAGATGGGTAACAAAGGCGCATTTATTCGGTTCGAAGCGCCTGATATGAAGCCAAACATTGTTACGTACTCAGCAGTGCCACACCCGGATGTGAAGCCAATGGCTTATGCAAACAACTTTCTTCGGATGTCGCTTTCTGTTGCTTCCGCTTCTAACTTGAATGGAGCCAAAATCGCACCTTTTGTAATATCAACTGCATTGACTTTGAAACAGGGGTTTTTGGTTGGTTTAATAGATGATTGTGCACTGCATTGTAAATGCCATTATGTTCGTGTTTCCTTGGAGCTGATTGAGGAAACCTTCTGGATACGTGTTATACTGATGGAAGTAGAAGAGGTGGACCTTTATGCAACTAATCCAGGACCAATTGATGGTTCAGTTTTATACGATCAAGATAAGCATGTATCTACGGCAGTTTGGGAAGGGCAGGAGCGTGGTGCTCTCAGATGCCATGAACACACTTCAAAGCTTGATCAATGGACACTTACTCCTAAGCAGATTGAGTTGGTACACAAGGCTGGTTTTGGTTCAGTCTGTGAAAAGTACCTTGGCAAAGCACCAGAATCTGGTTATACAAGTGGTGGAATGCAATGTGGACGATATGCTTGGGGTGCTGCAGCATTAGCATTTTTATATAGAGCTCTGGGAAACGCGTCTCTGAAAACTCAAAGTACTATTAGTGGCTGTTTAACACTACTGCAGTGCTGGAGTTACTTTTACCTGAATGTTGGCCGGCCAAAGCTTAACCAGGATCCTACGCGTGATCAATTTCCATTCGTGCTAAGATGGAAAGGAAAACAAAGTGGTCCAACAGCAAATCGCGATGTAATTTTCTACCGGAAGGCTTTGGATTCCCTAAAACCAAGTGATGTGGAGTGCCTGCCGTACAGAAGCATGGACAGTACGGTAATTCCAGAAGATATCAAAAATACTTTAATTCTTGGGAGGTCGAAGACGATGTTGATATGCTTTGACAAGGCAGAGAGACATCTTCCGAATCGATGCCTAAGACAATATGGCATGCTTCAATCAATTCCAGAGCATGTGGAGCACTGGGAGAGGAAGAGTCGAGGAGTTGACGGCGGCGTCAATTTGTCGGGGAAAATGGAATCGGAGCTTACTGAATGGATGGACCGGCATCTCCATATTGTCGATGGTTACGAGGAGGTAGACGAAAATGAGTACGTACAGTGGTATCTGAAAATTACTCGCAGATTTGTGGGAAGGCCTATTTCTCTCTCATCTGAGTTTCAAAGAACAAATGCCGGTTTGAGGGATATCGCGCATATAGCGGACACTTTTGCAACTGAGGGGCTGGATGCCGATCAAATTGAATCAATTTCTAGGATAAGATTGATTGCCCATGAATGTCTGAGAGACCAATTTGGTGGTCCAGCCATAGTGCCAGCCACCCCACAAGTTGAGCTCGGAAAGAGGGTGAGAGGAAAGGAGAGGGTCAGAAGAAAAGGTAGTGGTAAACGAATGCGGAGGGATGACGACGACGCCATTCAGTATAATGCGGCTAGTGAGGATGAGAGACCTCAGTTCTACGGTGCTGCTATGAAGATTGAGGAATTACAACTAAGTCATGTCGACAGAGAGGTAGCGGATCAAGCACAAATCTACGGTTTAGATAATGAGTTCAATTCCGTCCTGTTAATTCATACAGATGGTGACAGTGGTGGTGAGAATCTGCAGCTATGTGATGCAAACTTTGAGCTGGATCAATCGGCTTTAGGCTCTGCACCTGGTGAAGAAAATAATGAGGAGCCAAAGCATGTAGCTCCTGAGGTTAACAATGAAGAGCCAAAGGATTTAGCTTCTGAGCATAACAAGGAAGAAGCAAGCCATCTAACTACCGAGGTTAACAATGAAGAACTGAAGCATGCGGCTGATGCAGTTATCAAGGAAGAACTGAACCAAGTGATGGGCGAAGAAAACGTCGAGGAAATGGATGTTGCTAACAAGGTTCATGATGCACAACAACCTTCTGATGTCTCTAAGGAAGTTGATGATAATTCACAGCTCTGTGATGCAAGTCATGAGATCAAGAACTCAACTCATGAGGCCAATAACCCAGATCATGTGACTTGA 3753 0.4293 MSIDLSLPAGNRSQKPTGSDIQRVSLACYYSIQSPSRKYGQAIDLYTKAIELNSQNPVYWANRAFAHLRLEEYGSAIQDASKAIEVDPKYSKGYYRRGAAHLAMGKFKEALKDFQQVKKLCPNDPDATKKLKECEKAVMKLKFEEAISAPDTERRSVAESIDFRTIAVGFYFVEMPVASFEPSLSLVSIRPMKKNINTMQPSNIKLSSPSIKNRITANLLHPEGLYIPYFMKSKGSGLDRAFLLFFGLTSVATRVAAIVVGLLLLLGACWWSSYNADVEPQYSGASIEGDFVTLDFVKKMMDDFRNQKCLHKRYAYQIVLQTREMLLSLPPLVDINVPDGKHFTVCGDVHGQYYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLSDTFVELFAEVFCCLPLAHVINGKVFVVHGGLFSVDGVKLSDIRAINRFXLMCELLWSDPQPPPGRGPSKRGVGLSFGPDVTKSFLQENNLELVVRSHEVKDDGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTYSAVPHPDVKPMAYANNFLRMSLSVASASNLNGAKIAPFVISTALTLKQGFLVGLIDDCALHCKCHYVRVSLELIEETFWIRVILMEVEEVDLYATNPGPIDGSVLYDQDKHVSTAVWEGQERGALRCHEHTSKLDQWTLTPKQIELVHKAGFGSVCEKYLGKAPESGYTSGGMQCGRYAWGAAALAFLYRALGNASLKTQSTISGCLTLLQCWSYFYLNVGRPKLNQDPTRDQFPFVLRWKGKQSGPTANRDVIFYRKALDSLKPSDVECLPYRSMDSTVIPEDIKNTLILGRSKTMLICFDKAERHLPNRCLRQYGMLQSIPEHVEHWERKSRGVDGGVNLSGKMESELTEWMDRHLHIVDGYEEVDENEYVQWYLKITRRFVGRPISLSSEFQRTNAGLRDIAHIADTFATEGLDADQIESISRIRLIAHECLRDQFGGPAIVPATPQVELGKRVRGKERVRRKGSGKRMRRDDDDAIQYNAASEDERPQFYGAAMKIEELQLSHVDREVADQAQIYGLDNEFNSVLLIHTDGDSGGENLQLCDANFELDQSALGSAPGEENNEEPKHVAPEVNNEEPKDLASEHNKEEASHLTTEVNNEELKHAADAVIKEELNQVMGEENVEEMDVANKVHDAQQPSDVSKEVDDNSQLCDASHEIKNSTHEANNPDHVT 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1895 1250 MobiDBLite consensus disorder prediction 1202 1250 - -
Lele25g1895 1250 MobiDBLite consensus disorder prediction 1139 1178 - -
Lele25g1895 1250 MobiDBLite consensus disorder prediction 1196 1250 - -
Lele25g1895 1250 CDD MPP_PP5_C 282 591 IPR041753 -
Lele25g1895 1250 Pfam Plant mobile domain 750 952 IPR019557 -
Lele25g1895 1250 Gene3D - 270 597 IPR029052 -
Lele25g1895 1250 SUPERFAMILY Metallo-dependent phosphatases 291 596 IPR029052 -
Lele25g1895 1250 FunFam Serine/threonine-protein phosphatase 5 24 150 - -
Lele25g1895 1250 SUPERFAMILY TPR-like 37 149 IPR011990 GO:0005515
Lele25g1895 1250 FunFam Serine/threonine-protein phosphatase 5 268 597 - -
Lele25g1895 1250 PRINTS Serine/threonine phosphatase family signature 439 465 IPR006186 GO:0016787
Lele25g1895 1250 PRINTS Serine/threonine phosphatase family signature 541 557 IPR006186 GO:0016787
Lele25g1895 1250 PRINTS Serine/threonine phosphatase family signature 519 539 IPR006186 GO:0016787
Lele25g1895 1250 PRINTS Serine/threonine phosphatase family signature 372 399 IPR006186 GO:0016787
Lele25g1895 1250 PRINTS Serine/threonine phosphatase family signature 342 369 IPR006186 GO:0016787
Lele25g1895 1250 PRINTS Serine/threonine phosphatase family signature 405 429 IPR006186 GO:0016787
Lele25g1895 1250 MobiDBLite consensus disorder prediction 1129 1178 - -
Lele25g1895 1250 Pfam Calcineurin-like phosphoesterase 342 529 IPR004843 GO:0016787
Lele25g1895 1250 SMART tpr_5 57 90 IPR019734 GO:0005515
Lele25g1895 1250 SMART tpr_5 20 56 IPR019734 GO:0005515
Lele25g1895 1250 SMART tpr_5 91 124 IPR019734 GO:0005515
Lele25g1895 1250 ProSiteProfiles TPR repeat profile. 57 90 IPR019734 GO:0005515
Lele25g1895 1250 Pfam Tetratricopeptide repeat 59 89 IPR019734 GO:0005515
Lele25g1895 1250 Pfam Tetratricopeptide repeat 92 124 IPR001440 GO:0005515
Lele25g1895 1250 Gene3D Tetratricopeptide repeat domain 34 168 IPR011990 GO:0005515
Lele25g1895 1250 SMART pp2a_7 310 580 IPR006186 GO:0016787
Lele25g1895 1250 ProSiteProfiles TPR repeat profile. 91 124 IPR019734 GO:0005515
Lele25g1895 1250 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 55 598 - -
Lele25g1895 1250 Pfam PPP5 TPR repeat region 276 334 IPR013235 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1895 Lele-ChrLele25 26686939 26705922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1895 344 523 Calmodulin-binding Proteins AT5G63870 35.909 6.52e-37 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1895 25 26686939 26705922 Lele27g0185 27 1395623 1400001 hybridization
Lele25g1895 25 26686939 26705922 Lele28g1941 28 22689770 22705656 hybridization