Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1866 ATGGACTATTTTATCTTGTCAATGATGTTCATATGTACAGGTAGAGCAGGTACAGCTCAGAACTGGAATAGGGTTCAGTGCGAAACGAGCGTTGATATTTTGAAGGCTTTGGATATCCCCGTGAAGTGTATTGACACAGGAGCGAGGCCTGGCACCGCGTGGTGGACTCTGAGTCCGGTGCAGATCCATGGACAAGTCGACCTGCGCGCCGATCAACTACTTCGACCACGATGTTGTTTTCTTTTTAACAACGAGGAAGGAATCGTTGATGGTGTTGTTGATCCACGAGTTGATGATCAGAAATATCCATTCCGTGCTCGTGAGTTTATAGCTGAAGATACACTTGGAGTGTTCGCTGCCCTCTGCCATGCTCACATTGAAGAGTGGAAATCTGTGCTTACTTTTGAACAAGAACTGAATAACTTAATTGTAGCTTTAATTTTCGTATGTGAAGAAGGGAAAAATTGTCATTTGGCAATCGCAATGCAGCCATTATCTGTGATTGGAAACGACCTTGCTTGTGCTAATTTAGGACATATCAGGGAGAGAAAAGCATTTGCTCACGATATGGATTTGCACTTGGAAATGAAGGAGAGGCAACGTTGGACAGCTGAAGAGGATGCTTTATTAGGTGCATATGTCAAACAGTATGTTCCTAGGGAATGGAATCTTGTGTCCCAACGCATGAACAAAACCGTTAACAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCGAGCCCGGCATCCGAAAGGGGTCTCTTACTGAAGAAGAGAAATCTCTTGTCATCCGTCTTCAACAGATTTACGGCAACAAATGGAAGAAAATTGCTGCACAAGTCCCAGGTCGCACTGCTAAGAGATTAGGTAAGTGGTGGGAAGTATTTAAAGAGAAGCAGCAGAGAGAGAAAAAGGAGTTCAACAAAACAGTTGACCCAAATGATGTCTCCAAATACGATCATATACTCGAGACTTTTGCAGAAAAGCTTGTGAAAGAACGCCCTTTCCCATCCTACCTCATGGCTTCTCCTCCATCAGCTATGCTTCCTTGTTGGTCTTCAAACTCTAAAAGCACTTTAGGTATTAGGCCACCTTCCCCTTCTGTGACACTAAGTCTCTCTCCCTCAACTCCATTTCGATGGTTACAACCTGAGAAAATACCAGAGAATGGGAATGTAAAACCTCATGAAACTATTCCAGGTCTTGGTGATAACATGCTTGTTGTATCTGAGCTGGTTGAATGCTGTAAAGAATTGGAAGAAGGGCACCAGGCATGGTCATCGCATAGGAAGGAAGCAGCATGGAGGTTAAGGCGTGTGGAGTTGCAGTTGGAGTCAGAGAAAGCATGTCGTATGCGGGAGAAGATGGAAGAGTATGAAGCAAAGATTAAAGCTCTTTGGGAAGAACAGATAGCTGCTTTGGATAGAATGGAAGCCGAACACCGGGAGCAGCTAGCTGAACTAAGAAGAGATGCAGAAACCAAGGAGCAGAAATTTGCTGCAAAGCACTCAAGGCTTAGTAAGTTTCTGGAGCAGATAGGTTGCTGA 1554 0.444 MDYFILSMMFICTGRAGTAQNWNRVQCETSVDILKALDIPVKCIDTGARPGTAWWTLSPVQIHGQVDLRADQLLRPRCCFLFNNEEGIVDGVVDPRVDDQKYPFRAREFIAEDTLGVFAALCHAHIEEWKSVLTFEQELNNLIVALIFVCEEGKNCHLAIAMQPLSVIGNDLACANLGHIRERKAFAHDMDLHLEMKERQRWTAEEDALLGAYVKQYVPREWNLVSQRMNKTVNRDAKSCLERWKNYLEPGIRKGSLTEEEKSLVIRLQQIYGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQREKKEFNKTVDPNDVSKYDHILETFAEKLVKERPFPSYLMASPPSAMLPCWSSNSKSTLGIRPPSPSVTLSLSPSTPFRWLQPEKIPENGNVKPHETIPGLGDNMLVVSELVECCKELEEGHQAWSSHRKEAAWRLRRVELQLESEKACRMREKMEEYEAKIKALWEEQIAALDRMEAEHREQLAELRRDAETKEQKFAAKHSRLSKFLEQIGC 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1866 517 Pfam Myb-like DNA-binding domain 202 264 - -
Lele25g1866 517 CDD SANT 258 299 IPR001005 -
Lele25g1866 517 Gene3D - 257 316 - -
Lele25g1866 517 ProSiteProfiles Myb-like domain profile. 194 248 IPR001005 -
Lele25g1866 517 CDD SANT 201 248 IPR001005 -
Lele25g1866 517 Gene3D - 199 253 - -
Lele25g1866 517 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 249 303 IPR017930 -
Lele25g1866 517 SUPERFAMILY Homeodomain-like 199 293 IPR009057 -
Lele25g1866 517 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 196 517 - -
Lele25g1866 517 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 194 248 IPR017930 -
Lele25g1866 517 SMART sant 198 250 IPR001005 -
Lele25g1866 517 SMART sant 253 301 IPR001005 -
Lele25g1866 517 ProSiteProfiles Myb-like domain profile. 249 299 IPR001005 -
Lele25g1866 517 Coils Coil 473 500 - -
Lele25g1866 517 FunFam MYB-related transcription factor 199 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1866 Lele-ChrLele25 26402425 26406719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1866 196 517 MYB Transcription Factor Family AT2G37630 60.218 4.56e-134 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g1866 Myb_DNA-bind_6 1e-12 CL0123