Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1859 ATGAGGGACACAACCATGGAAGTGATGGGTAAGCTTAAAGTTAGGGCATCAGAACATGAGAGTGAAGAAAAAGAAGAAGAAGTGATGGCTCCTGGGTTTAGATTCCACCCCACAGAGGAAGAACTTGTAGGGTTTTACCTTCACAGAAAAGTTCAGAAGAAGCCACTTCGAATCGAACTCATCAAACAGATTGACATCTACAGATTCCATCCTTGGGATCTTCCAAAGAGTAATGGGGTGGAGGGGGAGAGGGAAGGATACTTTTTTTGCAGAAGAGGGAGAAAGTACAGGAACAGCAAGAGGCCTAACAGGGTGACAGTGAGTGGGTCTGGTTTCTGGAAAGCTACGGGGATTGACAAACATATCTATGGAGAAGGAGCTAAAAACGGCGTCGTAATTGGCCTCAAGAAGTCGTTAGTGTACCATCTAGGAACTGCTGGTAAAGCCTCCAAAACTGAATGGATGATGCATGAGTTTCGTCTTCCCCCCAACGACAAAACTACTCTTGATCATCATCCTCATCTTCATGAAGCTGAAGTTTGGACACTCTGCAAAATATTCAAACGAACCCCATCTCAGAAGAAGTACACACAAGCAGCAATCAAACCCAGCATAGCTCATTCAACTCCTGAATCAGGAAACTTAAGATCTGACCTCATCAATGGCAACTCATGCTTCACTTTCAAAAACCCAATTATCACTCAGCAAAATGATGAAAGGAAGCAGATTAGGAAGAACATTGAAGAGATTGAACACGAAAGAAATCGCTTATTTCTGGATCAGCTAGCTCAAGCTTCACCATCAATAGTATCTTACCCTAGCTTTTGGGACCCTGGTATGATGGAAGAGAATATATTTGCTAATGGAAACTGGAATGAGCTTCAACCTATGGTTCAATTAGCTATGGATGATCCATCCAAAATTTATTATGATTGCACATAG 942 0.4236 MRDTTMEVMGKLKVRASEHESEEKEEEVMAPGFRFHPTEEELVGFYLHRKVQKKPLRIELIKQIDIYRFHPWDLPKSNGVEGEREGYFFCRRGRKYRNSKRPNRVTVSGSGFWKATGIDKHIYGEGAKNGVVIGLKKSLVYHLGTAGKASKTEWMMHEFRLPPNDKTTLDHHPHLHEAEVWTLCKIFKRTPSQKKYTQAAIKPSIAHSTPESGNLRSDLINGNSCFTFKNPIITQQNDERKQIRKNIEEIEHERNRLFLDQLAQASPSIVSYPSFWDPGMMEENIFANGNWNELQPMVQLAMDDPSKIYYDCT 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1859 313 MobiDBLite consensus disorder prediction 1 29 - -
Lele25g1859 313 Gene3D NAC domain 38 193 IPR036093 GO:0003677|GO:0006355
Lele25g1859 313 SUPERFAMILY NAC domain 25 188 IPR036093 GO:0003677|GO:0006355
Lele25g1859 313 ProSiteProfiles NAC domain profile. 29 189 IPR003441 GO:0003677|GO:0006355
Lele25g1859 313 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 26 236 - -
Lele25g1859 313 Coils Coil 233 260 - -
Lele25g1859 313 Pfam No apical meristem (NAM) protein 31 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1859 Lele-ChrLele25 26357620 26360637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1859 18 237 NAC Transcription Factor Family AT5G39820 44.770 5.12e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele25g1859 NAM 4.8e-32 No_clan