Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1831 ATGGCTTCTCCTTCTTCTCTAGTTTTTCTGTTCTTTCACTCCCTTCTCTGCCTCACTGCATCTTCTTCTACTTCTGGTTCATCACTTCCTCTGTTGTCTCTCAAAAGGCAAGCTTCAATCTTGGTCTCTCTCAGACAAGGTTTTCAACCTCATAATTCTTCTTCTCTTGAATCATGGCATGTCTCCAACTTTCTGTCACTTTGTTCTTGGGATGGTATCAAATGTGACCGGACCAACAGGTCTGTGATTTCCTTCGACATATCTAATTACAACTTTTCTGGGTTTCTTTCCCCTGTCATAGCCGAGCTCCGGGGACTTGTGACTGTCTCTGTTGACGGCAACAGATTTTCAGGCGAGCTTCCTCCAGAGATTCTCAAGCTGCCCGAGCTTCACTTCCTCAACATATCCAACAACATGTTCACTGGGAATCTGATTACTTGGGACTTCTCCGACACGAGTGAGCTTGAAGTTCTTGATGCTTACGACAACGACTTTAACGGCGAGCTCCCTCTTGGTGTCACCAATCTTCACAAGCTCAGGCACTTGAATTTTGGCGGGAATTACATTTCTGGTAGAATCCCTGGAGAGTATGGGAAAATGGTGGGCTTGAACGTTCTCTCTCTTGCTGGGAATGATCTAAGTGGTTTTATACCCAGAGAACTTGGGAATCTCACTAATTTGACCCATTTATACTTGGGATATTTCAACAAATTTGACGGTGGAATCCCAAATGAGTTTGGGAATCTTATCAATTTGGTTCATCTTGACCTTGCAAATTGCCGCTTGAATGGTACAGTTCCTTCAGAATTAGGCAAGCTTTCAAAATTAGACACACTTTTCTTGCAAACAAATCAGCTTACTGGTTCAATCCCACCTCAGATTGGCAATTTGAGCAACTTGAGATCTCTTGATTTTTCTAACAATGAGTTAATTGGAGAAATCCCATTTGAGCTCTCGAATCTCCATGAGCTAACACTCATCAACTTGTTCATCAACAAATTGCATGGTGAGATTCCTCAGTTCATCTCTGAGCTACCAAAGCTTGAAACTTTACATCTATGGAAGAACAACTTCACTGGTTCAATCCCTCCTGGGCTTGGCCAGAATGGGAAATTAATTGAACTTGATCTTTCATCAAATAAGCTTACTGGGTTAGTTCCAAAATCTCTCTGCTTTGGGAAGAAGCTCAAGATCTTAATCTTGCTCAATAATTTTCTCTTTGGATCTTTGCCTGATGATCTTGGAGAATGCTACGCACTTCAAAGAGTTCGCTTGGGTCAGAACTATTTAACAGGGAAAATACCAAATGGGTTTCTTTATCTTCCTCAACTTTTACTTCTTGAGCTGCAGAACAACTATCTCACTGGTGTTCTTCCTCAAGATTCAGCAGCAAATTCAACATCAAAACTAGAGCAGTTGAATCTCTCAAACAACCGTCTTTCGGGGTCTCTCCCGGAATCAATTGGGAATTTCCCAAATTTGCAGAATCTTCTCCTCAGTGAAAACAGATTCTCTGGAGAAATCCCACCAGATATAGGGAGGTTGAAGAATCTGTTAAAGTTGGATATGAGCAGGAACAACATATCAGGTAGTATTCCTTCAGAGATAGGGAATTGTGCTTTGCTCACTTACTTAGACTTGAGCCAGAACCAACTTTCAGGTCCTATTCCTGTTCAAATTTCCCAAATTCACATCTTAAACTACCTGAATGTCTCAAGGAACAACCTTAACCAGAGCCTCCCAAAAGAACTAGGTACCATGAAAGGGTTAACCTTAGCAGATTTCTCTCACAACAACTTCTCTGGTTCAATACCTGAAGTTGGTATGTTCACAGTCTTGAATTCAACCTTCTTTCAAGGAAACCCAAATCTATGTGGGTATGATGTAAACCCATGTGGCACTCATTCATCAAACTCACTTTCAGACTCTGATGAGAATAACAACACGAAATCCGGAGTTCCCGGGAAGTACAAGCTTCTTTTTGCACTTGCACTACTGGGATGTTCTTTCATTTTTGCAGCCTTGGCCATCATCAAAAGCCGAAAGAAGGCGAGGAGGAATTCGAACTCGTGGAAGCTCACGGCGTTTCAGAAGCTAGAATATGGAAGTCAAGACATATTGGAATGCATAAAGGAGAGCAACGTGATAGGAAGAGGAGGAGCTGGGATTGTGTACAGAGGCATCATGCCAAATGGTGAGGAGCTAGCAGTGAAAAAACTCCTAGGATTCAGCAAAGGCTCATCTCATCATGACAATGGCTTATCTGCGGAAATAAGAACACTGGGCAGGATAAGGCACAGGTACATTTATGCATACACATTGAAAGTGGATGAGAAGAGCGATGTTTATAGCTTTGGAGTGGTATTGCTAGAACTCTTAACGGGTAGAAGGCCGGTGGGCGATTTCGGAGAAGAAGGAATAGACATTGTTCAGTGGACAAAGATGCAAACCAATAACTGGAGCAAAGACAAGGTTCTAAGGATCCTTGATGAGAGGCTGCAAAATAGAATCCCTATAGATGAAGCAAAACAAGTGTTCTTTGTGGCCATGCTTTGTGTTCAAGAACACAGTGTGGAGAGACCCACCATGAGAGAAGTGGTTGAAATGCTTGTACAAGCAAAGCAGCCCAATACATTTTAA 2640 0.422 MASPSSLVFLFFHSLLCLTASSSTSGSSLPLLSLKRQASILVSLRQGFQPHNSSSLESWHVSNFLSLCSWDGIKCDRTNRSVISFDISNYNFSGFLSPVIAELRGLVTVSVDGNRFSGELPPEILKLPELHFLNISNNMFTGNLITWDFSDTSELEVLDAYDNDFNGELPLGVTNLHKLRHLNFGGNYISGRIPGEYGKMVGLNVLSLAGNDLSGFIPRELGNLTNLTHLYLGYFNKFDGGIPNEFGNLINLVHLDLANCRLNGTVPSELGKLSKLDTLFLQTNQLTGSIPPQIGNLSNLRSLDFSNNELIGEIPFELSNLHELTLINLFINKLHGEIPQFISELPKLETLHLWKNNFTGSIPPGLGQNGKLIELDLSSNKLTGLVPKSLCFGKKLKILILLNNFLFGSLPDDLGECYALQRVRLGQNYLTGKIPNGFLYLPQLLLLELQNNYLTGVLPQDSAANSTSKLEQLNLSNNRLSGSLPESIGNFPNLQNLLLSENRFSGEIPPDIGRLKNLLKLDMSRNNISGSIPSEIGNCALLTYLDLSQNQLSGPIPVQISQIHILNYLNVSRNNLNQSLPKELGTMKGLTLADFSHNNFSGSIPEVGMFTVLNSTFFQGNPNLCGYDVNPCGTHSSNSLSDSDENNNTKSGVPGKYKLLFALALLGCSFIFAALAIIKSRKKARRNSNSWKLTAFQKLEYGSQDILECIKESNVIGRGGAGIVYRGIMPNGEELAVKKLLGFSKGSSHHDNGLSAEIRTLGRIRHRYIYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKMQTNNWSKDKVLRILDERLQNRIPIDEAKQVFFVAMLCVQEHSVERPTMREVVEMLVQAKQPNTF 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1831 879 Gene3D Ribonuclease Inhibitor 36 145 IPR032675 -
Lele25g1831 879 Gene3D Phosphorylase Kinase; domain 1 706 770 - -
Lele25g1831 879 Pfam Leucine rich repeat 346 404 IPR001611 GO:0005515
Lele25g1831 879 Gene3D Ribonuclease Inhibitor 509 632 IPR032675 -
Lele25g1831 879 Gene3D Ribonuclease Inhibitor 399 508 IPR032675 -
Lele25g1831 879 Pfam Leucine rich repeat N-terminal domain 35 76 IPR013210 -
Lele25g1831 879 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 8 460 - -
Lele25g1831 879 SUPERFAMILY Protein kinase-like (PK-like) 708 871 IPR011009 -
Lele25g1831 879 SMART serkin_6 710 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1831 879 Pfam Protein tyrosine and serine/threonine kinase 775 870 IPR001245 GO:0004672|GO:0006468
Lele25g1831 879 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 349 636 - -
Lele25g1831 879 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 237 342 - -
Lele25g1831 879 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 149 236 - -
Lele25g1831 879 ProSiteProfiles Leucine-rich repeat profile. 469 491 IPR001611 GO:0005515
Lele25g1831 879 Pfam Leucine Rich Repeat 299 321 IPR001611 GO:0005515
Lele25g1831 879 Pfam Leucine Rich Repeat 469 491 IPR001611 GO:0005515
Lele25g1831 879 SUPERFAMILY L domain-like 314 653 - -
Lele25g1831 879 Gene3D Ribonuclease Inhibitor 146 238 IPR032675 -
Lele25g1831 879 Gene3D Transferase(Phosphotransferase) domain 1 771 878 - -
Lele25g1831 879 SMART LRR_typ_2 297 321 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 441 464 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 345 369 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 467 491 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 103 127 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 515 539 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 200 224 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 563 587 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 370 392 IPR003591 -
Lele25g1831 879 SMART LRR_typ_2 249 273 IPR003591 -
Lele25g1831 879 PRINTS Leucine-rich repeat signature 372 385 - -
Lele25g1831 879 PRINTS Leucine-rich repeat signature 467 480 - -
Lele25g1831 879 SUPERFAMILY L domain-like 64 387 - -
Lele25g1831 879 Gene3D Ribonuclease Inhibitor 239 394 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1831 Lele-ChrLele25 26106777 26111106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1831 770 872 Receptor kinase-like Gene Family AT5G65700 67.961 1.70e-36 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele25g1831 PK_Tyr_Ser-Thr 1.9e-08 CL0016