Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1807 ATGGCATTCACAGTAGAGAGGTGCGATGAGATCGAGAAGATGGCAGCAATGGTCTTCACGATGGTGGATGAAACGTCGTCTCCGTCGTCGACGGTGTCGGCACCGTTCCTGACCAAGACATATCAGCTGGTCGACGACCCTCTCACGGACCACATTGTCTCTTGGGGTTCCGATGAGTCCACTTTCGTCGTTTGGAGACCTCCTGAGTTCGCCAGAGATCTCCTGCCCAACTACTTCAAACATAACAACTTCTCCAGCTTCGTTCGCCAGCTCAATACCTATGGTTTCAAGAAGGCAGTCGCAGATAGGTGGGAATTTGCGAATGAGTATTTCAGAAAAGGAGCTAAGCATCTTCTTTGTGAAATCCACAGAAGAAAAAGCCCAAACCACCACCACCTCCATGATCACCCGCCGATGCCGCCGCCACAAAATTACCAAAGTCTCTTTTGGAACGACACAGAAGTTTCTCCATTATTAATCCCACCACCTTATTCTCCCACTAAAAGAGGATCATCATCATCAGGAACCAGTACTCATGAAGTTCTAAGAGCACTTTCAGAAGATAATCAGAGACTGAGAAGGAAGAACTTGTTGCTGTTATCAGAACTCACTCACATGAAGAGTCTCTACAATGACATTATATACTTCATTCAAAACCATGTCAAACTAGTGGATCATAATATTAATGATCATCCATTGGAGAAAATAAGAGGCACAAATAGTGATAATGATGATCATATTCCCAAGCTGGTTGAATTGGATTCATCAGTGTCACTTGATCATTATCAGACTCATCAAACTGATACTAAGTCGGATAATTCATTAGCTGGTTCCGTGAAGCTATTTGGGGTCCCACTTAGTAGCAGAAAGAGGTTGCGTTCAGAAGATATGGATGAGGAAGAATAA 906 0.4393 MAFTVERCDEIEKMAAMVFTMVDETSSPSSTVSAPFLTKTYQLVDDPLTDHIVSWGSDESTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKAVADRWEFANEYFRKGAKHLLCEIHRRKSPNHHHLHDHPPMPPPQNYQSLFWNDTEVSPLLIPPPYSPTKRGSSSSGTSTHEVLRALSEDNQRLRRKNLLLLSELTHMKSLYNDIIYFIQNHVKLVDHNINDHPLEKIRGTNSDNDDHIPKLVELDSSVSLDHYQTHQTDTKSDNSLAGSVKLFGVPLSSRKRLRSEDMDEEE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1807 301 FunFam Heat stress transcription factor B-4 28 126 - -
Lele25g1807 301 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele25g1807 301 PRINTS Heat shock factor (HSF) domain signature 36 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele25g1807 301 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele25g1807 301 SMART hsfneu3 32 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele25g1807 301 Coils Coil 182 202 - -
Lele25g1807 301 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 252 IPR027725 -
Lele25g1807 301 Pfam HSF-type DNA-binding 36 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele25g1807 301 Gene3D - 29 126 IPR036388 -
Lele25g1807 301 SUPERFAMILY "Winged helix" DNA-binding domain 34 125 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1807 Lele-ChrLele25 25839143 25840232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1807 31 291 HSF AT1G46264 48.515 5.94e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele25g1807 HSF_DNA-bind 1.2e-31 CL0123