Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele25g1788 | ATGTCAAGTGGACCAACACACTGGTGTTATGAGTGTGGACATCCGATTGCGCTTGAAGGGGGAGAAGTCACTTGCCCTTATTGTCATGAAGGCTTTGTGCAAGAACTTAATGAGAGGCATGAGTTTCAACCATATAATGCTCTTGAAGAGTTTCATCCCATGCCTGACTTTTTTGATGCCATACATACCTTTATGGCACAAAGAGCTCCCGAACCAAGATTTGGGCTTATAGATGCTTTAGACAATTTCATGAGGCAGAGAATAGGTGGGCAATACCCCAACATTGATGGTAGACAAAGGTCTCCTAATGCACGATTTCCTGAATGGAGTCAGGATTTTTTCAATTCTGGCCCTTCTTTCGTATTTCATGGTACGGGAGGCGAACCAAGGCCTATTGATTTTGGCAGTTTATTGATGGCCCCGGGACTGGAAGCATTTATTCAACAGCTCACAATGAATGATCATAGAGGTCCTCCTCCAGCCTCACATTCTTCAATTGATGCAATGCCTACCATTAAGATCACACGAGCGCATCTTCGCTCTGATTCTCATTGTCCAGTCTGTCAAGAAAAATTTGAGCTAGGCGCCGAGGCTAGGAAAATGCCCTGTAACCATATTTATCATTCTGACTGTATTGTTCCTTGGTTGGTTCAGCATAACTCTTGTCCTGTTTGCCGCGTTGAGCTTCCACCTCCAGGACAGAATAGTTCCCATGGTGGAACTCGTGGAGGAAGGAATGTCAATAGCAGTAGTAATAGTAGTAATCGTCGCGATAGCTCAAGGAGGCAGAACCAAGGAGGGAGAAATCCACTATCAGCTTGGTGGCCATTCTGA | 834 | 0.4508 | MSSGPTHWCYECGHPIALEGGEVTCPYCHEGFVQELNERHEFQPYNALEEFHPMPDFFDAIHTFMAQRAPEPRFGLIDALDNFMRQRIGGQYPNIDGRQRSPNARFPEWSQDFFNSGPSFVFHGTGGEPRPIDFGSLLMAPGLEAFIQQLTMNDHRGPPPASHSSIDAMPTIKITRAHLRSDSHCPVCQEKFELGAEARKMPCNHIYHSDCIVPWLVQHNSCPVCRVELPPPGQNSSHGGTRGGRNVNSSSNSSNRRDSSRRQNQGGRNPLSAWWPF | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele25g1788 | 277 | CDD | RING-H2_RNF126_like | 185 | 226 | - | - | |
Lele25g1788 | 277 | SUPERFAMILY | RING/U-box | 165 | 232 | - | - | |
Lele25g1788 | 277 | MobiDBLite | consensus disorder prediction | 234 | 270 | - | - | |
Lele25g1788 | 277 | MobiDBLite | consensus disorder prediction | 233 | 277 | - | - | |
Lele25g1788 | 277 | FunFam | E3 ubiquitin-protein ligase RING1-like | 148 | 232 | - | - | |
Lele25g1788 | 277 | Pfam | Ring finger domain | 184 | 226 | IPR001841 | - | |
Lele25g1788 | 277 | SMART | ring_2 | 185 | 225 | IPR001841 | - | |
Lele25g1788 | 277 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 147 | 233 | IPR013083 | - | |
Lele25g1788 | 277 | ProSiteProfiles | Zinc finger RING-type profile. | 185 | 226 | IPR001841 | - | |
Lele25g1788 | 277 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 96 | 230 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele25g1788 | Lele-ChrLele25 | 25680284 | 25681117 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele25g1788 | 110 | 256 | C3H Transcription Factor Family | AT1G68180 | 33.333 | 1.80e-23 | 94.0 |