Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1787 ATGGCCGTCACCTTCTCACATCTCCACGCAGAATCAGGACTCAAGTCCCTTAATGAATTCCTCTCCGGCAAGACCTACATTTCTGGGGATCAATTGACTAAGGATGACATTAAAGTCTACGCCTTTGTTAACCCAACCGCCGCTTTCCCTAATGCCAGCAAGTGGTACGATGCCGTCTCTTCACGTCTTGCTGAAAGCTTCCCTGGAAAAGCTCAAGGTGTGAGATTCAGTGGCCAGGCTGCTCCAGCTGAAGCTGCTCCTGCCAAGGCGGCTGCTGCTGCTGATGATGATGACCTTGACCTCTTTGGTGATGAGACAGAGGAGGAAAAGGCAGCAGCAGAGGCAAGGGAGGCTACGAAAAAGGAATCCTCCAAGAAGAAAGAGAGTGGGAAGTCCTCTGTTCTGCTTGATGTGAAGCCTTGGGATGATGAGACAGACATGAAGAAGCTTGAAGAGTCTGTTCGTTCCGTCCAGATGCCTGGGCTTCTGTGGGGAGCATCCAAACTGGTTCCTGTCGGTTACGGTATTAAGAAGATGCAGATAATGATGACCATTGTTGATGACCTTGTCTCTGTGGATTCCCTTATTGAGGAACATCTTACAGTTGAGCCATGCAATGAGTATGTTCAAAGTTGTGACATTGTTGCGTTCAACAAAATCTAA 663 0.4842 MAVTFSHLHAESGLKSLNEFLSGKTYISGDQLTKDDIKVYAFVNPTAAFPNASKWYDAVSSRLAESFPGKAQGVRFSGQAAPAEAAPAKAAAAADDDDLDLFGDETEEEKAAAEAREATKKESSKKKESGKSSVLLDVKPWDDETDMKKLEESVRSVQMPGLLWGASKLVPVGYGIKKMQIMMTIVDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1787 220 Gene3D - 124 220 IPR014717 -
Lele25g1787 220 SMART EF1_GNE_2 131 220 IPR014038 GO:0003746|GO:0006414
Lele25g1787 220 MobiDBLite consensus disorder prediction 107 132 - -
Lele25g1787 220 CDD EF1B 134 220 IPR014038 GO:0003746|GO:0006414
Lele25g1787 220 SUPERFAMILY eEF-1beta-like 128 220 IPR036219 -
Lele25g1787 220 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 220 - -
Lele25g1787 220 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 95 103 IPR001326 GO:0003746|GO:0005853|GO:0006414
Lele25g1787 220 Gene3D - 4 66 - -
Lele25g1787 220 SUPERFAMILY GST C-terminal domain-like 10 64 IPR036282 -
Lele25g1787 220 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 209 220 IPR001326 GO:0003746|GO:0005853|GO:0006414
Lele25g1787 220 Pfam EF-1 guanine nucleotide exchange domain 133 220 IPR014038 GO:0003746|GO:0006414
Lele25g1787 220 FunFam Elongation factor 1-beta 1 like 125 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1787 Lele-ChrLele25 25673061 25675062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1787 1 220 Eukaryotic Initiation Factors Gene Family AT5G12110 73.246 3.98e-107 306