Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1781 ATGGGAAATTCCTGTAGGAAACCCATTTTCCATGTGTCTTCCTCAAACATTTCTGGTCAGTATCTGCTATTAATTTCATGTTTCTGGAAGGCGAAGTCTCAAATTGAGACAAGTAAGAATTCAAATTCTTCAGAACGAAAAGCTGCATCACAAAGTTCAGAATCAACTATCAGCAGATCCATATCTTCTAATCTTAAATCCTTCAGCTTCAATGATCTAAAAGAAGCCACAAGAAATTTCAGACAAGAAAACTTAATTGGGGAGGGAGGATTTGGGTTTGTTTACAAGGGATGGATCAATGAGAACTCCTTCGCTCCCACGAGACCAGGGAGTGGGATCACGGTGGCCATCAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGGTCATAATAGCCATTTAGCTCATGATCCCTCAAATTTACTTTTTCTTTCTGCAGAAGGTGTTAGGCCCTTATCATGGGCTGCACGGATCAATATTGCAGTTGGCGTTGCTAGAGGATTAGCATTTTTGCATACCTTGGACGCAAATGTTATCTACCGTGACTTGAAGACTTCTAATGTATTACTTGATTCAGTACGGAGAAGGGTGGTAGAGGTTGACAAACTCGGAATTGCACGGGAAACTCTTGTCGATTGGGCGATGCCATTTCTCAAGGATGGCAAGCGAGTTTCGAGAATTATGGATTTGAGGTTAGGTGGCCAGTACTCGAAAACAGGAGCTCAAGCTGCAGCTGCAATTGTATATAAATGCCTAGATGCTGATCCAAAGTACAGACCAACAATGATACATGTTGTAGCCACGTTGGAAGAACTCCATTCCTCGAACGCAACAATCCCGAGGACCCCACCAAAGTCTGAGTCTGAGTTTAGTTTGGGGCATGCAGAGCATAATAGAGAATACCTTACTGCAATGGCTTTGTTTCTCTTGTTTTCTTTGTTGCTAAAGGGAACAAGTGCCGAGTCTTTGTGTGATTGTAATTGTGGGATAATGAGTTCCAGTTGTGAATAA 1023 0.4223 MGNSCRKPIFHVSSSNISGQYLLLISCFWKAKSQIETSKNSNSSERKAASQSSESTISRSISSNLKSFSFNDLKEATRNFRQENLIGEGGFGFVYKGWINENSFAPTRPGSGITVAIKKLKPESFQGHKEWLGHNSHLAHDPSNLLFLSAEGVRPLSWAARINIAVGVARGLAFLHTLDANVIYRDLKTSNVLLDSVRRRVVEVDKLGIARETLVDWAMPFLKDGKRVSRIMDLRLGGQYSKTGAQAAAAIVYKCLDADPKYRPTMIHVVATLEELHSSNATIPRTPPKSESEFSLGHAEHNREYLTAMALFLLFSLLLKGTSAESLCDCNCGIMSSSCE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1781 340 ProSitePatterns Protein kinases ATP-binding region signature. 86 119 IPR017441 GO:0005524
Lele25g1781 340 PANTHER OS01G0588500 PROTEIN-RELATED 42 136 - -
Lele25g1781 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Lele25g1781 340 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Lele25g1781 340 Pfam Protein tyrosine and serine/threonine kinase 147 213 IPR001245 GO:0004672|GO:0006468
Lele25g1781 340 SMART serkin_6 80 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1781 340 Gene3D Phosphorylase Kinase; domain 1 49 141 - -
Lele25g1781 340 SUPERFAMILY Protein kinase-like (PK-like) 55 282 IPR011009 -
Lele25g1781 340 Gene3D Transferase(Phosphotransferase) domain 1 210 287 - -
Lele25g1781 340 Gene3D Transferase(Phosphotransferase) domain 1 143 209 - -
Lele25g1781 340 ProSiteProfiles Protein kinase domain profile. 80 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1781 Lele-ChrLele25 25586868 25589767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1781 36 195 Glycoside Hydrolase AT3G07070 34.184 1.45e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele25g1781 PK_Tyr_Ser-Thr 2e-05 CL0016