Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1779 ATGAAGCGTCGTATAGGTAAATATGAGGTGGGAAGGACAATTGGTGAGGGAACATTTGCAAAAGTGAAATTTGCAAGGAACACTGAGACTGGGGAGCCTGTAGCTATCAAAATTCTGGAGAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAGCAGATCAGGCGGGAAATAGCAACAATGAAGTTAATCAAGCATCCAAATGTTGTTCGATTATATGAGGTAATGGGGAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTGACAGGAGGAGAGCTCTTTGACAAAATTCCAGAAAATTTGCTGCTAGATGCTTATGGCCAGCTTAAAGTTTCTGATTTTGGTTTGAGTGCACTATCACAACAAGTCAAGGATGATGGACTGCTTCATACTACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTGATGATAGAGGCTATGATGGAGCAACTGCAGACTTGTGGTCTTGTGGAGTAATTCTCTTTGTATTACTTGCAGGTTACTTGCCTTTTGATGACCCTAATCTTATGAACCTGTATAAAAAAATCTCTGCTGCTGAATTTACTTGTCCCCCATGGATTTCATTCAGTGCCAGGAAATTGATAACTCGAATTTTGGATCCTAACCCCATGACTCGTATCACTATATCTGAAATCTTGGCCGATGAATGGTTTAAGAAAGATTATAAGCCTCCAGTTTTTGAGGAGACAGGGGAGACCAACCTTGATGACATTGATGCTGCCTTTAGAGATTCTGAAGAACACCTTGTGACGGAGAAGAAGGAAGAACAGCCAACAGCCATCAATGCATTTGAATTAATTTCCATGTCCAAAGGGCTAAACCTCGAAAACTTGTTTGATATAGAGCAGGCATTGAAAAGAGAAACAAGGTTCACTTCAAGATGCCCTGCCAAAGAGATAGTTAACAAGATTGAAGAAGCTGTAAAGCCTCTTGGTTTTGATGTGCAGAAGAAAAACTACAAGATGAGGCTTGAGAATGTGAAAGCAGGAAGGAAGGGAAACCTTAATATTGCCACTGAGATATTTCAAGTCGCACCTTCTCTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACATTGGAGTTTCACAAGTTCTACAAGAATCTTTCAACAAGGCTTGATGATGTTGTTTGGAAAGCTGAGGAGGAGGATGCTCAAGAAACGCAGTGA 1200 0.4083 MKRRIGKYEVGRTIGEGTFAKVKFARNTETGEPVAIKILEKEKVLKHKMAEQIRREIATMKLIKHPNVVRLYEVMGSRTKIYIVLEFVTGGELFDKIPENLLLDAYGQLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLDDRGYDGATADLWSCGVILFVLLAGYLPFDDPNLMNLYKKISAAEFTCPPWISFSARKLITRILDPNPMTRITISEILADEWFKKDYKPPVFEETGETNLDDIDAAFRDSEEHLVTEKKEEQPTAINAFELISMSKGLNLENLFDIEQALKRETRFTSRCPAKEIVNKIEEAVKPLGFDVQKKNYKMRLENVKAGRKGNLNIATEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTRLDDVVWKAEEEDAQETQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1779 399 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 378 - -
Lele25g1779 399 Pfam NAF domain 267 326 IPR004041 GO:0007165
Lele25g1779 399 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Lele25g1779 399 ProSiteProfiles Protein kinase domain profile. 8 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1779 399 Gene3D Transferase(Phosphotransferase) domain 1 86 259 - -
Lele25g1779 399 FunFam Non-specific serine/threonine protein kinase 1 87 - -
Lele25g1779 399 Gene3D Kinase associated domain 1, KA1 264 389 - -
Lele25g1779 399 Pfam Protein kinase domain 8 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1779 399 Pfam Protein kinase domain 98 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1779 399 SUPERFAMILY Protein kinase-like (PK-like) 4 239 IPR011009 -
Lele25g1779 399 FunFam Non-specific serine/threonine protein kinase 264 389 - -
Lele25g1779 399 ProSiteProfiles NAF domain profile. 265 289 IPR018451 GO:0007165
Lele25g1779 399 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Lele25g1779 399 FunFam Maternal embryonic leucine zipper kinase 95 268 - -
Lele25g1779 399 CDD CIPK_C 271 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1779 Lele-ChrLele25 25555972 25560585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1779 1 370 CBL-interacting serine-threonine protein kinases AT2G26980 72.660 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele25g1779 Pkinase 7.7e-28 CL0016