Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1769 ATGCATATAAGCCAGGTAGGGTTTTTATCATCGAACGAGGAGGCAAAGGGAGAAGGAGGACTCGTAGTTGCTGGAGGCAGAAAATTCCTGAAAATGGTGAAGTTCTTGAAGCAGAACAAGGCCGTTATTGTCCTTCAGGGACGCTATGCTGGTCGCAAAGCGGTGATCGTACGTACCTTCGACGACGGCACACGTGACCGCGCGTACGGCCACTGTTTGGTCGCCGGAATCAAGAAGTACCCCAGCAAGGTCATCAAGAAGGATTCCGCCAAGAAGACGGCAAAGAAATCTAGGGTTAAGGCTTTCGTCAAGCTCGTGAACTACCAGCATCTCATGCCCACTCGCTACACTCTGGATGTGGATCTCAAGGATGTAGTGACCATAGATGCCCTTCAATCTAAAGACAAGAAGGTTACCGCCTTGAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACCGGCAAGAACAGGTGGTTCTTTACCAAGCTTAGGTTCTAA 501 0.499 MHISQVGFLSSNEEAKGEGGLVVAGGRKFLKMVKFLKQNKAVIVLQGRYAGRKAVIVRTFDDGTRDRAYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVTIDALQSKDKKVTALKETKKRFEERFKTGKNRWFFTKLRF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1769 166 FunFam 60S ribosomal protein L27 32 166 - -
Lele25g1769 166 PANTHER 60S RIBOSOMAL PROTEIN L27 32 166 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lele25g1769 166 Coils Coil 131 151 - -
Lele25g1769 166 Pfam Ribosomal L27e protein family 83 166 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lele25g1769 166 CDD KOW_RPL27 37 119 IPR041991 -
Lele25g1769 166 ProSitePatterns Ribosomal protein L27e signature. 155 166 IPR018262 GO:0003735|GO:0005840|GO:0006412
Lele25g1769 166 Gene3D - 32 166 IPR038655 -
Lele25g1769 166 SUPERFAMILY Translation proteins SH3-like domain 34 166 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1769 Lele-ChrLele25 25430810 25431310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1769 32 166 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 85.926 5.75e-85 244