Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1741 ATGGAGGGATTAATGGCGACATTGGAGTCTTATTTCGCTTATGCTTCTACTTCATCATCATATGGTCGAGAACTTTACAATTTTATTAAAAATTATATAAAAAAATATTCAAAATATTATGATGATGACGAGGACGATGATAACGATTACTTCAATTCTTTTCCACCTGGATATCGATTCAACCCTACTGAGGAAGAACTCGTCGTCTCTTATCTCATGAAGAAAGTCAGGAACGAACCTTTGCCGCGAAATCAGATGTTAGAAGTTGATGTATATCAGCACGACCCTGAAATTGTTTGCAATAAGTATAAGAATACTGGAGAAAATGAATGGTATTTTTTCTCACCAAGGGAAAGAAAATATCCAAATGGAGTAAGGCCAAAGAGAACAACAAGAGATGGGTATTGGAAGGTTTCAGGATCAGAAAAATTGGTATTTTCAAAAGGAAGAGCCATTGGAAAATGGAATACGTTGGTGTATTACAGAGGGAAGGCTCCAACAGGTACAAAGACGAATTGGATTATGCGTGAGTTTAAACTTGCACAACAATCTCATAGGAGAACAAGTAATATGGACATGATGACTGAAGCCAACAAGAATAGCAAAAGCAAAAGCAAAGGAATAAAAGAGGAGGAGGCTGAAGAAGGATTTGCAACAACAAGTGATATTATCAAAGCACCTCAATACCTAAGAAATGGATATGATCAGTATAATCATCACTTAGATCAATATCAGTATCAAGATTTCCATTTAAGTGATCATAATACGTTTCCTTCTTATGTGGAGGATAAAACTCAAACATTCTCAGAAATTGATGGATTCCAAGACTTATTTATGATGTTGGAGGGATTTGATAATAATAATAATAATAATATTGGTCCTTATTCTCTGAAGGAACTAAGTCATGATCTTAACATGGCAGTTACCACTATGGGTTCTAAGTCAAGGTCCAATAATGGTGAAGCTATTATATGTAATAATGTATAG 987 0.3475 MEGLMATLESYFAYASTSSSYGRELYNFIKNYIKKYSKYYDDDEDDDNDYFNSFPPGYRFNPTEEELVVSYLMKKVRNEPLPRNQMLEVDVYQHDPEIVCNKYKNTGENEWYFFSPRERKYPNGVRPKRTTRDGYWKVSGSEKLVFSKGRAIGKWNTLVYYRGKAPTGTKTNWIMREFKLAQQSHRRTSNMDMMTEANKNSKSKSKGIKEEEAEEGFATTSDIIKAPQYLRNGYDQYNHHLDQYQYQDFHLSDHNTFPSYVEDKTQTFSEIDGFQDLFMMLEGFDNNNNNNIGPYSLKELSHDLNMAVTTMGSKSRSNNGEAIICNNV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1741 328 SUPERFAMILY NAC domain 52 188 IPR036093 GO:0003677|GO:0006355
Lele25g1741 328 Gene3D NAC domain 63 213 IPR036093 GO:0003677|GO:0006355
Lele25g1741 328 PANTHER NAC TRANSCRIPTION FACTOR 56 54 240 - -
Lele25g1741 328 Pfam No apical meristem (NAM) protein 55 180 IPR003441 GO:0003677|GO:0006355
Lele25g1741 328 ProSiteProfiles NAC domain profile. 54 200 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1741 Lele-ChrLele25 25066071 25068824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1741 53 189 NAC Transcription Factor Family AT1G52890 50.365 5.87e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele25g1741 NAM 1.3e-29 No_clan