Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1692 ATGTGCCGGAAGCAGCCAGGAATTGCGATTGGACGACTCTGCGAGAAATGTGATGGCAAATGTGTGATCTGTGATTCTTATGTGCGTCCTTGTACACTTGTCCGGGTCTGTGATGAATGCAACTACGGCTCATTTCAGGGTCGTTGTGTCATATGCGGAGTAGGAATCTCTGATGCTTACTACTGCAAGGAGTGTACACAACAGGAGAAGGATAGGGATGGATGCCCTAAAATTGTCTGTATCTTATTACTGCTAAGGCTGCTTTTTGAGATGAATGTATTTTACTTGGACGCCAGACTGGAAAGGGTATGTGATCCATGAAATCTTTCCAGATTTTCCGCCATTAACGTATCTCGGAGACAACACCCATTTCTTCTATCTTCTTTCAATTTTCTCAGTTCCAACGGTACCACTAATCCCACTGTCGAAAAACCGTCGGTTGATCCGGTTCAGTATTCGGGTTTGGGACCTACGAAGCCCCATGAGAAGCCGCGAGTGGTAGTTCTGGGTTCTGGGTGGGCTGGATGCAGGCTCATGAAGGGGTTGGACCCTGAAATCTATGACATTATTTGCGTCTCACCTCGCAATCATATGGTCTTTACGCCTCTGTTGGCTTCCACATGTGTTGGAACTCTGGAATTTAGATCTGTTGCTGAACCCATTGCCAGGATCCAACCCGCCATTTCTAGGGAGCCTGGTTCTTATTTTTTCCTTTCCAATTGTACTGGAATTAGTGCAGATAAGCATATGGTTCATTGTAAGACTGTAACTGATGGTGAACAAGCGCTAGATCCTTGGAGTTTTACGGTCTCATATGATAAGCTTGTAATTGCATTAGGAGCACAGCCCACCACTTTTGGAATTCATGGAGTCAAAGAACATGCAATTTTTCTTCGTGAAGTTCACCATGCTCAGGAAATTCGCAGGAAGTTGCTTCTTAATTTGATGTTGTCTGATGTGCCAGGCATTTCAGAAGAGGAAAAGAAAAGGCTTTTGCACTGTGTGGTGGTGGGAGGTGGTCCAACTGGAGTGGAATTCAGTGGTGAACTTAGTGATTTTATCACGAGAGATGTCCGTCAAAGATATGCCCATGTGAAGGATTACATCCATGTTACTTTAATTGAGGCAAACGAGATATTGTCTTCCTTTGATGTCCGTCTCAGGAATTATGCTACCAAGCAGTTGACAAAGTCAGGAGTCCGTCTTGTTCGTGGTACTGTGAAAGATGTTCAAGATCAGAATATTATCCTTAATGATGGCACTGAGGTTCCATATGGTTTGCTGGTATGGTCAACTGGTGTTGGTCCATCACCTCTTGTTCATGCTTTAGATCTTCCCAAAGCTCCTGGTGGAGGAAGGATTGGAGTTGACGAGTGGCTTCGTGTTCCTTCAGTACAAGACATTTTCTCAATAGGCGACTGCAGTGGATTTGTCGAAAGTACAGGAAGACAAACTCTTCCAGCCTTGGCCCAAGTGGCAGAGAGGCAAGGGAAATACTTAGCAAACCTCCTAAACAAAATTGGGAAAGCAGGAGGAGGCCGAGCAAACTGTGGAAACGACATTGATTTAGGAGAACCATTTGTCTACAAGCACCTTGGAAGCATGGCATCTGTTGGCAGCTACAAGGCTCTTGTGGACCTTAGACAGAGCAAGGAGGCAAAAGGTATATCACTGGCTGGATTTATCAGTTGGTTCATTTGGCGATCAGCATATCTAACACGGGTCGTGAGCTGGCGAAACAGATTCTATGTGGCAATCAACTGGGCTACAACTTTACTATTTGGTCGTGATATCAGCAGGATATGA 1806 0.4502 MCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGVGISDAYYCKECTQQEKDRDGCPKIVCILLLLRLLFEMNVFYLDARLERVCDPXNLSRFSAINVSRRQHPFLLSSFNFLSSNGTTNPTVEKPSVDPVQYSGLGPTKPHEKPRVVVLGSGWAGCRLMKGLDPEIYDIICVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSNCTGISADKHMVHCKTVTDGEQALDPWSFTVSYDKLVIALGAQPTTFGIHGVKEHAIFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDYIHVTLIEANEILSSFDVRLRNYATKQLTKSGVRLVRGTVKDVQDQNIILNDGTEVPYGLLVWSTGVGPSPLVHALDLPKAPGGGRIGVDEWLRVPSVQDIFSIGDCSGFVESTGRQTLPALAQVAERQGKYLANLLNKIGKAGGGRANCGNDIDLGEPFVYKHLGSMASVGSYKALVDLRQSKEAKGISLAGFISWFIWRSAYLTRVVSWRNRFYVAINWATTLLFGRDISRI 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1692 601 Pfam Pyridine nucleotide-disulphide oxidoreductase 165 497 IPR023753 GO:0016491
Lele25g1692 601 PRINTS FAD-dependent pyridine nucleotide reductase signature 166 185 - -
Lele25g1692 601 PRINTS FAD-dependent pyridine nucleotide reductase signature 272 290 - -
Lele25g1692 601 PRINTS FAD-dependent pyridine nucleotide reductase signature 333 351 - -
Lele25g1692 601 FunFam Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial 155 600 - -
Lele25g1692 601 Gene3D - 157 601 - -
Lele25g1692 601 Pfam PHF5-like protein 1 81 IPR005345 GO:0000398
Lele25g1692 601 PANTHER NADH DEHYDROGENASE 151 601 IPR045024 GO:0003954|GO:0006116
Lele25g1692 601 SUPERFAMILY FAD/NAD(P)-binding domain 156 505 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1692 Lele-ChrLele25 24604647 24611650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1692 166 492 EF-hand Containing Proteins AT4G28220 38.393 5.05e-70 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1692 25 24604647 24611650 Lele01g1230 01 7438365 7441075 CCT
Lele25g1692 25 24604647 24611650 Lele02g1500 02 19159533 19162202 CCT
Lele25g1692 25 24604647 24611650 Lele03g1242 03 7400510 7404376 CCT
Lele25g1692 25 24604647 24611650 Lele04g1484 04 20012874 20015629 CCT
Lele25g1692 25 24604647 24611650 Lele27g0396 27 3572925 3582878 hybridization
Lele25g1692 25 24604647 24611650 Lele28g1698 28 19911706 19917379 hybridization