Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1689 ATGTGTGGAATTCTCGCTGTGCTTGGTTGTACCGACGACTCCCAGGCCAAGAGAGTCCGCGTCCTTGAACTCTCTCGAAGATTGAGGCATCGTGGTCCTGATTGGAGTGGTCTTCACCAACATGGTGATTGCTACTTGGCTCATCAACGGCTGGCCATAATTGATCCTGCTTCTGGTGATCAACCTCTCTTTAATGAAGACAAATCCGTCGTGGTCACGGTGAATGGAGAGATATACAACCATGAAGAGCTGAGGAAACAACTGTCCAACCACAAGTTCAGGACAGAAAGTGACTGTGATGTTATTGCACATTTGTATGAGGAATATGGAGAAAATTTTGTGGACACGCTGGACGGCATCTTTTCATTTGTTCTTCTGGACACCCGAGACAACAGCTTCATTGTTGCAAGAGATGCTATTGGTGTCACTTCCCTTTACATTGGCTGGGGACTAGATGGCTCTATTTGGATTTCATCTGAGCTCAAAGGGCTCAATGATGATTGTGAGCATTTCGAGTGGTTCCCTCCCGGCCACTTGTACTCAAGCAAAGAAGGAGGCTTCCGTAGGTGGTACAATCCTCCATGGTTCTCTGAGGTCGTTCCATCAACCCCTTATGATCCCTTAGCTCTGAGGCTTGCTTTTGAGAAGGCAGTCATAAAAAGGCTTATGACAGATGTGCCTTTCGGTGTTTTACTGTCTGGAGGTTTGGACTCATCCTTGGTTGCATCCATCACCGCTCGCTACCTCGCTGATACAAAAGCTGCCAAACAGTGGGGACCAAAACTACACTCCTTCTGTGTAGGCCTTGAGGGCTCACCAGATCTGAAGGCTGCAAAAGAAGTTGCAGAGTACATAGGGACTGTTCACCATGAATTTCACTTCACTGTCCAGGATGGCATAGATGCCATTGAAGATGTAATCTATCATATAGAAACATATGATGTGACTACAATCAGAGCTAGTACCCCTATGTTCCTCATGTCACGCAAGATTAAATCGCTCGGAGTGAAAATGGTTATCTCTGGAGAGGGATCCGATGAAATTTTTGGCGGGTATCTGTACTTCCACAAGGCCCCTAACAAGAAGGAGTTCCATGAAGAAACTTGCCGCAAGATTAAGGCACTTCATCAGTATGATTGCTTGAGAGCCAATAAAGCAACATCTGCTTGGGGTCTGGAAGCTAGAGTCCCCTTTCTGGACAAGGAGTTTATCAATGTTGCAATGAACATTGATCCTGAGTTTAAAATGATTAAACGAGATGAAGGACGGATTGAGAAGTGGGTTCTAAGGAGAGCCTTTGATGATGAAGAGCATCCTTATCTTCCAAAGAACATTTTATACAGACAGAAAGAACAATTCAGTGATGGAGTTGGCTATAGTTGGATTGATGGCCTTAAAGCCCATGCTGCAAAACATGTGAGTGACAAAATGATGTTCAATGCTGCTAACATTTTCCCCCACAACACTCCAACCACCAAAGAGGCATATTATTACAGAATGATCTTTGAGAGGTTCTTCCCACAGAACTCTGCAAGGCTTACTGTTCCGGGAGGCGCGAGTATTGCTTGCAGCACCGCGAAAGCAGTGGAGTGGGACGCAGCCTGGTCTAACAATCTGGATCCTTCTGGCAGAGCAGCACTTGGAGTGCATGCTTCCGCATATGACAACCAAAACAAAGCTGTAGAGCCAGAGAAGATCATCCCCAAGATGGAAATTCCTTTTGGAGTAGCAATCCAGAGCTAA 1743 0.4578 MCGILAVLGCTDDSQAKRVRVLELSRRLRHRGPDWSGLHQHGDCYLAHQRLAIIDPASGDQPLFNEDKSVVVTVNGEIYNHEELRKQLSNHKFRTESDCDVIAHLYEEYGENFVDTLDGIFSFVLLDTRDNSFIVARDAIGVTSLYIGWGLDGSIWISSELKGLNDDCEHFEWFPPGHLYSSKEGGFRRWYNPPWFSEVVPSTPYDPLALRLAFEKAVIKRLMTDVPFGVLLSGGLDSSLVASITARYLADTKAAKQWGPKLHSFCVGLEGSPDLKAAKEVAEYIGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFINVAMNIDPEFKMIKRDEGRIEKWVLRRAFDDEEHPYLPKNILYRQKEQFSDGVGYSWIDGLKAHAAKHVSDKMMFNAANIFPHNTPTTKEAYYYRMIFERFFPQNSARLTVPGGASIACSTAKAVEWDAAWSNNLDPSGRAALGVHASAYDNQNKAVEPEKIIPKMEIPFGVAIQS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1689 580 PANTHER ASPARAGINE SYNTHETASE 1 554 - -
Lele25g1689 580 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Lele25g1689 580 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Lele25g1689 580 PIRSF Asn_synthetase_glu-h 1 363 IPR006426 GO:0004066|GO:0006529
Lele25g1689 580 PIRSF Asn_synthetase_glu-h 357 521 IPR006426 GO:0004066|GO:0006529
Lele25g1689 580 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Lele25g1689 580 Gene3D HUPs 196 513 IPR014729 -
Lele25g1689 580 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 514 - -
Lele25g1689 580 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 201 479 - -
Lele25g1689 580 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Lele25g1689 580 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Lele25g1689 580 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Lele25g1689 580 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Lele25g1689 580 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1689 Lele-ChrLele25 24569210 24573396 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1219 01 7353530 7358347 Lele25g1689 25 24569210 24573396 CCT
Lele02g1489 02 19089372 19094181 Lele25g1689 25 24569210 24573396 CCT
Lele03g1232 03 7316094 7320925 Lele25g1689 25 24569210 24573396 CCT
Lele04g1474 04 19938523 19943327 Lele25g1689 25 24569210 24573396 CCT
Lele25g1689 25 24569210 24573396 Lele27g0400 27 3629132 3633399 hybridization
Lele25g1689 25 24569210 24573396 Lele28g1693 28 19864495 19868976 hybridization