Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1688 ATGTCGTGCTCCGTGGCCCTCTCTAACTCTCCGGTCTTCTCTCCGTCGTCTTCTCTTTTCTGCAACAAGCCCTCCGTCGTCATCTCTTCCTCGCCGGAATCCCTTTCTCTCTCTTTGTCCCACCTTAAGCCTTCCGCTTCCGCTTCCGCTTCTTCCTCTTCGCCTTCTTCCCCTTCCTCGCCTTTCCGCCTCCGCCTCCTCAAGCCCCCTCCTCCTACCGCCCTTTCCAATTCCGCCTGCGCCTCCGCTCCTTCCTCCTCCACCTCGCCAACCGGTACCGTTTTGAAGAGGAAGAGGCCCGCAAGGCTTGATATTCCCGTTGTCTCATCTCTCACTTTTGGGGTTCCGGCGACGCCGTCTGCTTCGGTGGCCCGAGATGTTCTAGAGGCTGAAGGGCTTGGGTTTTCTGTGTATTGTAAGAGAGGCAGGCGAGAGTACATGGAAGATCGTTATTCTGCTTCCGTCAATCTTCAAGGGCAACCTAAACAGGCTTTCTTTGGCATATTTGATGGGCACGGAGGTTCAAAAGCTGCTGAATTTGCTGCACATAACTTAGAAAAGAACGTCATGGATGAAGTAACAAGAAGAGATGATGACATAGAGGAGGCAGTGAAACATGGTTACCTGAACACTGATTCTGATTTCTTAAAAGAGGATCTTCATGGTGGCTCCTGCTGTGTAACCGCACTGATTAAGAACGGAAACCTCGTTGTTTCTAACGCCGGTGATTGCCGTGCTGTTATTAGCCGAGGTGGAGTTGCAGAATCCCTCACATCTGACCACAGACCTTCAAGGGAAGATGAAAGGGACAGAATTGAGACCACAGGCGGCTATGTTGATTTATGCCGTGGGGTTTGGAGGATCCAAGGATCTCTAGCAGTTTCTAGAGGAATTGGAGATAGATATTTGAAGCAATGGGTTATAGCTGAACCTGAGACTACAGTTCTTAGGATTGAACCTGAACATGACTTGTTGATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAAGAAGCTGTGGATATTGCTCGTCCTCTTTGCAATGGGGATAGTAGTAATATAGCAAAACCATTGATGGCCTGTAAGAAGCTTGTAGATTTGTCTGTTTCAAGAGGCTCAAGTGATGACATAAGTGTTATGCTAGTAAAACCGGGACACTTTATGTAA 1173 0.4834 MSCSVALSNSPVFSPSSSLFCNKPSVVISSSPESLSLSLSHLKPSASASASSSSPSSPSSPFRLRLLKPPPPTALSNSACASAPSSSTSPTGTVLKRKRPARLDIPVVSSLTFGVPATPSASVARDVLEAEGLGFSVYCKRGRREYMEDRYSASVNLQGQPKQAFFGIFDGHGGSKAAEFAAHNLEKNVMDEVTRRDDDIEEAVKHGYLNTDSDFLKEDLHGGSCCVTALIKNGNLVVSNAGDCRAVISRGGVAESLTSDHRPSREDERDRIETTGGYVDLCRGVWRIQGSLAVSRGIGDRYLKQWVIAEPETTVLRIEPEHDLLILASDGLWDKVSNQEAVDIARPLCNGDSSNIAKPLMACKKLVDLSVSRGSSDDISVMLVKPGHFM 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1688 390 SMART PP2C_4 124 384 IPR001932 -
Lele25g1688 390 SUPERFAMILY PP2C-like 130 385 IPR036457 -
Lele25g1688 390 CDD PP2Cc 134 384 IPR001932 -
Lele25g1688 390 MobiDBLite consensus disorder prediction 45 98 - -
Lele25g1688 390 ProSitePatterns PPM-type phosphatase domain signature. 165 173 IPR000222 GO:0043169
Lele25g1688 390 Pfam Protein phosphatase 2C 135 379 IPR001932 -
Lele25g1688 390 SMART PP2C_SIG_2 142 386 IPR001932 -
Lele25g1688 390 ProSiteProfiles PPM-type phosphatase domain profile. 134 386 IPR001932 -
Lele25g1688 390 PANTHER PROTEIN PHOSPHATASE 2C 65 384 IPR015655 GO:0004722|GO:0006470
Lele25g1688 390 MobiDBLite consensus disorder prediction 45 61 - -
Lele25g1688 390 FunFam probable protein phosphatase 2C 25 127 389 - -
Lele25g1688 390 Gene3D - 126 389 IPR036457 -
Lele25g1688 390 MobiDBLite consensus disorder prediction 75 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1688 Lele-ChrLele25 24523524 24525289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1688 1 390 PP2C-type Phosphatase Gene Family AT2G30020 66.169 4.29e-170 479