Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1684 ATGCTTCCCATCTCAATGGCCTCTGAAGATAATCACGTACACATATTTCAATGGCGTTTCATTGAAATAAGTCACTCAAACTTCCACTTATATAGCCATGGCATCTTCCTCCTACTTTTCTTCTTCTCCCTTATCATTCTGATCGTCACGTTGTTCATTCTCGCCCATGTATGTCGCCGGCGCTACACCAGTGCCTCTCTGGCACCACCTGCCAAGAGTCTCCGGTGGGGTGAGTTTGAGATGGAAGAAATGGAGAATAAGAGTGTGGGAGACCTGAATGTAGAATGCTGCATATGTTTGAGTGTGTTGAAGGAAGGTGGTGGGAAGGTGAAGGTGTTGCCAGAATGTGAGCATGCTTACCATTCAGAGTGTGTAGAGGTTTGGTTAAGTGCAAACCCTAGTTGTCCTCTTTGTAGGGCTTCACTTCATAAATTTATGAGTCATAATGCTATCAACAACAACAATGTATGA 471 0.4416 MLPISMASEDNHVHIFQWRFIEISHSNFHLYSHGIFLLLFFFSLIILIVTLFILAHVCRRRYTSASLAPPAKSLRWGEFEMEEMENKSVGDLNVECCICLSVLKEGGGKVKVLPECEHAYHSECVEVWLSANPSCPLCRASLHKFMSHNAINNNNV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1684 156 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 42 143 - -
Lele25g1684 156 ProSiteProfiles Zinc finger RING-type profile. 96 139 IPR001841 -
Lele25g1684 156 Pfam Ring finger domain 95 139 IPR001841 -
Lele25g1684 156 SMART FANCL_C_2 92 146 - -
Lele25g1684 156 SUPERFAMILY RING/U-box 95 148 - -
Lele25g1684 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 148 IPR013083 -
Lele25g1684 156 SMART ring_2 96 138 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1684 Lele-ChrLele25 24477343 24477813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1684 15 143 C3H Transcription Factor Family AT3G11110 30.986 1.03e-13 63.2