Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1683 ATGGCGGTTTGCGTGACCGACAGGGCTCGAGCCGCCGCTTGTAGAAACGGTCAAGCGGCGGCTCACCTGAAGGTGGTCTCGATCTCCGTGATTTTCTTCACTAGTATGTTCGGCATGTCGTTGCCGGTGCTATTAGCGCTATATTTCCAAGGGAAATCGCTCTACGATAAGGCAATCGTAGTGACTAAATGCTTTGCCGCCGGTGTCATCCTCTCTACCTCTCTCGTCCACGTTCTCCCCGATGCGTACGGTGCATTCTCCGATTGCCAGGTCGCTTCAATGCATCCATGGAAGGATTTCCCCTTCGCAGGCCTGGTCACGCTAATCGGCGCTCTGATGGCTCTGTTTGTCGACATCGCCGCAAGCTCACATGTGGAGCACTCGCACTCGCCCGCGCAGACTCAGTACGCGCTGGTTGGAGCACAGGAGAAGCTGGAATCGGGCGAGTCGAAGACCGAGTTGAGGATTACGAGATTCGAGAGGGAACGACAAGCGGCGGAGGAAATGGCGAAATTGAAGCAGAGATTGGTGTCTAAGGTGCTGGAGATTGGAATAATCTTTCATTCTGTGATAATCGGAGTGACGATGGGAATGTCTCAGAACGTGTGCACGATTAGGCCTCTCGTCGCCGCTTTGGCATTTCATCAAATCTTCGAGGGAATGGGTCTCGGTGGTTGCGTCGCTCAGGCGGGTTTTAGCTTTGGAACCACGGCTTATATGTGCTTCATGTTCTCGGTGACGACACCGATGGGAATTATATTGGGGATGATGTTATTTTCAGTAACAGGTTATGATGATAGTGATCCAAAAGCTTTGATCATGGAAGGCTTGTTAGGTTCAATTTCTTCTGGGATTCTGATATATATGGCTCTGGTTGACCTAATTGCAGTAGATTTCTTTCACAGTAAGCTTATGAGCTCCAATTTGACATTGAAGAAGGTTTCTTTTGTTGCCTTGACTCTTGGCTCTACTGCCATGTCAATTGTGGCCCTATGGGCTTGA 1002 0.502 MAVCVTDRARAAACRNGQAAAHLKVVSISVIFFTSMFGMSLPVLLALYFQGKSLYDKAIVVTKCFAAGVILSTSLVHVLPDAYGAFSDCQVASMHPWKDFPFAGLVTLIGALMALFVDIAASSHVEHSHSPAQTQYALVGAQEKLESGESKTELRITRFERERQAAEEMAKLKQRLVSKVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTTAYMCFMFSVTTPMGIILGMMLFSVTGYDDSDPKALIMEGLLGSISSGILIYMALVDLIAVDFFHSKLMSSNLTLKKVSFVALTLGSTAMSIVALWA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1683 333 Coils Coil 149 176 - -
Lele25g1683 333 Pfam ZIP Zinc transporter 22 330 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele25g1683 333 TIGRFAM zip: ZIP zinc/iron transport family 11 333 IPR004698 GO:0005385|GO:0016020|GO:0071577
Lele25g1683 333 PANTHER ZINC/IRON TRANSPORTER 20 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1683 Lele-ChrLele25 24467630 24469543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1683 1 333 Inorganic Solute Cotransporters AT2G30080 64.826 8.89e-155 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1683 25 24467630 24469543 Lele27g0405 27 3733964 3735780 hybridization
Lele25g1683 25 24467630 24469543 Lele28g1685 28 19761873 19763907 hybridization