Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1682 ATGGAGTTCAAGATCAGAAGCTATGAAGAACAATCTGACAGAGCTCAAGTGGAAGATCTCGAGAGAAGGTGCGAGGTAGGGCCAGCAGAAAGCGTTTTTCTCTTCACAGACACCATGGGCGATCCCATTTGTAGAATCCGAAACAGTCCCATGTACAAGATGCTGGTCGCAGAACTGGGCAACAAGGAACTGGTTGGTGTGATTCAAGGATCTATAAAACATGTTACAGTACCATGCAAGGATTTGGCTAAGGTTGGTTATGTCCTAGGTTTAAGGGTAGTGCCTGATCTTCGAAGAAAAGGGATAGCTTCAAGCCTTGTGTTAAAACTTGAAGAATGGTTCAAATCAAACGAAGTGGATTACGCATACATGGCTACAGAGAAAGAGAATCAAGCTTCTGTTGGTCTTTTCATGAACAAGTTTGGTTACACTAAGTTCAGAACACCTTCTATTCTGGTGAACCCAGTGAATCATAGGAGCTTCAGAATCTCTTCCAACATTGAGATTTCAATGGTCAAGATTGATCAAGCTGAGTCTCTGTATAGAAGATTCATGGGGCCCACTACTGAGTTCTTCCCTAATGACATAGACAAAATACTCAGAAACAAGCTTAGTTTAGGGACATGGGTGGCTCACTTTAAAGGAGATTATTTTGATTTTAGTTCTGCAGATTGCCAAACAGTCCCTAATAGTTGGGCCATGCTTAGTGTTTGGAACAGTGGAGAAATCTTCAAGCTGAGACTTGGAAAAGCACCTTTGTGTTGCTTGTTATACACTAAGAGTTGGGGTTTTATTCATAAGATTTTCCCATGTTTGAAGATGATTCCAAGTTTGCCTGATTTCTTTAGTCCATTTGGGTTTTATTTTGTGTATGGGGTTTATCATGAAGGGCCATTGTCAGGGAAGCTTGTGAGAGGGCTGTGTGAGTTTGTGCACAACATGGCTGCTGAGAATTGTTGTGAGATTGTTGTGACTGAAGTTGGAGGCAGAGATGATGAACTCAAACATCACATTCCACATTGGAAATTGCTGTCAACTCCTGAAGACTTGTGGTGCATAAAGGCACTGAAGAAAAATAATCATAATAATGAGTTAATTACCAAAACCCCACCAAGTACTAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1152 0.4115 MEFKIRSYEEQSDRAQVEDLERRCEVGPAESVFLFTDTMGDPICRIRNSPMYKMLVAELGNKELVGVIQGSIKHVTVPCKDLAKVGYVLGLRVVPDLRRKGIASSLVLKLEEWFKSNEVDYAYMATEKENQASVGLFMNKFGYTKFRTPSILVNPVNHRSFRISSNIEISMVKIDQAESLYRRFMGPTTEFFPNDIDKILRNKLSLGTWVAHFKGDYFDFSSADCQTVPNSWAMLSVWNSGEIFKLRLGKAPLCCLLYTKSWGFIHKIFPCLKMIPSLPDFFSPFGFYFVYGVYHEGPLSGKLVRGLCEFVHNMAAENCCEIVVTEVGGRDDELKHHIPHWKLLSTPEDLWCIKALKKNNHNNELITKTPPSTRALFVDPREV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1682 383 CDD NAT_SF 54 123 - -
Lele25g1682 383 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 383 - -
Lele25g1682 383 Gene3D - 3 150 - -
Lele25g1682 383 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 146 IPR016181 -
Lele25g1682 383 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 3 168 IPR000182 GO:0016747
Lele25g1682 383 Pfam Acetyltransferase (GNAT) family 49 143 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1682 Lele-ChrLele25 24436107 24437367 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele25g1682 Acetyltransf_1 2.9e-14 CL0257