Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1679 ATGCAACATACGTACGCATCTAACTTCCAATCCAACGGGACAAAAGTGATAGAACAAGGGTACTCGATCACTGTGTCCGATTACCTCCCTGAACTGTTCGAATTCCCATCCAACTCCACAAATCTATTTGAGTTCGAGTTCAAAAATCAAGGGATTGACCTCTCAACGCCCAAATCGGAAACCGAGACTTCACAATTTGATGCCAATTTCTGCCAATTCGAAGCAGATTCGCCTGAAACATCAACCTCTGGCTCACAGTCCAGCAGTTGCATGTTCGTGAAGAAATCTCATTTTAATCGGAAACCTTCGTTGCAAATCCCGCTGACCAGAAAAACCGAGTGGATCCAATTTGGAAATCCGGATCAACAACAGGAGGTTTCAGAAATGTTCGTGCCGGATAATTCAAACCATGAAGAGGAGAAAAAGCACTACAGAGGGGTCCGACAGAGACCGTGGGGCAAGTTCGCAGCCGAGATTCGGGACCCGAACAAACGTGGATTAAGGTTGTGGCTCGGAACGTTGGACACAGCGATGGAAGCCGCAAAAGCCTACGATCGAGCTGCGTTTAGGCTTCGCGGCTCCAAAGCCATACTGAATTTTCCTCTGGAAGCAGGGACCTGGGGTTTGACGGACGAAACGGAACAGAAAAAACGCCGGCGGGAAGATGTTGAGGTAGAGGCTGAAATGGAAGTGAAAAAGCCAGTGGTGAAGAAAGAGAAGACGGCGGAATCTGACGTTGGAGGGATAAGGGGTAGGCAGTTAACGCCGTCAATGTGGACGGGTTCTAGGGTAAAGATTTGA 801 0.4844 MQHTYASNFQSNGTKVIEQGYSITVSDYLPELFEFPSNSTNLFEFEFKNQGIDLSTPKSETETSQFDANFCQFEADSPETSTSGSQSSSCMFVKKSHFNRKPSLQIPLTRKTEWIQFGNPDQQQEVSEMFVPDNSNHEEEKKHYRGVRQRPWGKFAAEIRDPNKRGLRLWLGTLDTAMEAAKAYDRAAFRLRGSKAILNFPLEAGTWGLTDETEQKKRRREDVEVEAEMEVKKPVVKKEKTAESDVGGIRGRQLTPSMWTGSRVKI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1679 266 FunFam Ethylene-responsive transcription factor 2 142 203 - -
Lele25g1679 266 PANTHER DNA-BINDING DOMAIN 88 221 IPR044808 GO:0003700|GO:0009873
Lele25g1679 266 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Lele25g1679 266 PRINTS Ethylene responsive element binding protein signature 183 203 IPR001471 GO:0003700|GO:0006355
Lele25g1679 266 PRINTS Ethylene responsive element binding protein signature 144 155 IPR001471 GO:0003700|GO:0006355
Lele25g1679 266 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
Lele25g1679 266 SUPERFAMILY DNA-binding domain 143 202 IPR016177 GO:0003677
Lele25g1679 266 Gene3D AP2/ERF domain 142 203 IPR036955 GO:0003700|GO:0006355
Lele25g1679 266 CDD AP2 142 201 IPR001471 GO:0003700|GO:0006355
Lele25g1679 266 Pfam AP2 domain 143 193 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1679 Lele-ChrLele25 24405348 24406508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1679 48 248 AP2-EREBP Transcription Factor Family AT5G47230 50.980 1.79e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele25g1679 AP2 4.3e-13 CL0081