Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1667 ATGGGAGGTTCTTCTCCTTGTGCTTCCTGCAAGTTGCTACGACGTCGTTGCACCAACGAGTGCGTTTTTGCCCCTTATTTTCCTTCTGATGATCCTCACAAGTTTGCCATCGTCCACAAGGTCTTCGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAGCTTCCGGTGCATCAAAGAGCGGATGCTGTGAGCAGTCTAGTTTACGAGGCAAATGCCAGAGTGAGGGATCCGGTGTACGGGTGTGTCGGAGCTATATCGTATCTGCAAAGCCAAGTTTCACAGTTAAAAATGCAGCTTGCAGTGGCTCAAACAGAGATTATGTGCATTCAGATGCAGCAAGATCCTACAAACTTATTATCAACTCATCAGATTGATCATTACCAAGATGACAATAAGTCGCTTATCTTGTCTGATAATAACTACGGAAGCAGCAATATTCATGATAATGTTGCCGATCATCACTATCTCAGTTTTGCTTCTTCTTCTTCCTCATCTAGTAATGTAATCCAAGACCCTTTTAAGAGAGAGTCATTTTGGAGTTAA 543 0.4365 MGGSSPCASCKLLRRRCTNECVFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLKMQLAVAQTEIMCIQMQQDPTNLLSTHQIDHYQDDNKSLILSDNNYGSSNIHDNVADHHYLSFASSSSSSSNVIQDPFKRESFWS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1667 180 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lele25g1667 180 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lele25g1667 180 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1667 Lele-ChrLele25 24183921 24185025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1667 3 180 AS2 family AT2G30130 66.316 6.37e-80 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele25g1667 LOB 1.4e-42 No_clan