Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1642 ATGGCTGGGATTGATGATAATGTTCCTTTAACTAGCGAGTGGGGTCATCCTAGTCCGAGTCCAAGAACCTTTTTCTCTAAGATGTTAGGTGAAGATAATCTTACAAGACAAATCTCAGATCATCCTGGAAGTGGTAGAACTGAGGAGCCATTTCTGCAACAAAATCAAGAGCTCATTATGACTGGAAATTTCAACACAAGAGACACAGCACTACAAGATGATGCTTCTGGTGGCCAATTATCTGACACAAATTCTTTGTCTGAGAATAAGTCTAGCTCAAGAGGGAACCTTGTTGAAAGGATGGCTGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACAGAAAGCATTAGATCCGCTGATCCTACTATCTATTCGGATACTCGATCTGCTTACTTTACCATCCCTCCTGGCCTCAGTCCAACCACGCTATTAGAGTCTCCAGTGTTCCTTTCTAATTCACTGGCACAACCGTCTCCAACAACTGGAAAGTTTCCATTTATCTCAAATGGAAACTTCCGGGGTTCAGAAATGAACTCTGGTGCCCCTGAAAAAACTAAAGATAACAACTTTGATGACATTTATGCATCAACGTTTGCTTTCAGGACTACCACAACAGATTTGGGCTCTTTCTATAATGTTGCTGCTAGAAAAATGAATCCGACGATGCTGCCAGCACAATATCTCGCTGCTGAGGTCTCAGCTTCAGACATGACTGATCCTCCCACTCAAAATGATAGTAGAGCATCAGTTGAGGAACCAGCAGATGAAGAGGGAGGTCAAAGAGGACATGGAGATTCACAAGCTGCTGGTGTTGGGGGCACACCATCTGAAGATGGATATAACTGGAGAAAGTACGGACAGAAACAAGTTAAAGGGAGTGAGTATCCGCGAAGTTACTACAAATGTACACATACAAATTGTACGGTAAAGAAGAAAGTGGAGCGATCTCATGAGGGCCACATAACAGAAATCATCTACAAGGGAAATCACAACCATCCAAAACCGCCCACAAATCGCAGATCTGCAATAGGGTCTGTTAACCCTATCAGCGACATGCAAGCGGATGCAACTGAAAGTACCGAGCTGCATGGTGGGGGTGATGGTGAACTGGGCTGGGCAAGCACAAAAAAAGGAAATATGGCTAGAAATGGTGATGGGAAGCATGAGAACCTTGAAGTGACATCTTCAGCAGTATCTGTGGGCGGCCCTGAATTCGGCAACCAGTCCTCCAATTTGGCCAGTCAGAATGGTACTCAATTTGAATCAGGAGATGCAGTGGATGCCTCATCTACTTTCTCTAACGATGAAGATGATGATGATAGGGCCACTCATGGAAGTGTATCAGTAGGTTATGATGGAGAAGGAGATGAATCAGAGTCTAAAAGAAGAAAACTGGAATCTTATCCAAATACAGCAGAATTGAGTGGAGCCACTAGAGCTATCCGTGAGCCTAGAGTTGTTGTTCAAACTACCAGCGAAGTTGATATCCTTGACGATGGATATCGTTGGCGTAAATACGGACAAAAAGTTGTCAAAGGAAATCCCAATCCCAGGAGTTACTACAAGTGCACCAATGTCGGTTGCACAGTAAGGAAGCATGTGGAGAGAGCATCACATGATCTCAAATCTGTGATCACTACATATGAAGGAAAGCACTATCATGATGTTCCTGCAGCTCGCAATAGCAATCAAGGCAACGCTGCAGCTTCTAGTGCTGCTACTGGTCAAGCTTCTTCTGTTATTCAGAGTCACAGAGCTGAAGCTTCGCAAGTTCATAACAGTATTGGGAGGCTTGATAGGCCTGTTTTGGGCCTGGGCTCGTTCAACTTTCCCGGATCTGGGCCTAGGCCTAGGCCTGTCAGGCCACAGCTCGGGCCCTCCCCTGGCTCTTCCTTTGGAATTGGAATGAATCAGTCAGGTTTCCCCAACCTGGCCACCATGGCAGCTTTGGGCCCGGCCCATAAGCTTCCAGTCATGCCCGTTCATTCGTTCTTGCCCAATCAACGTCCACCAAACATGGGCTTCATGTGGCCCAAAGGGGAGCCCAATTTGGAGCCCATTCCAGATCGTGGGCTTAATATGCCTGCTGGTTCATCAGTATATCAAGATATAATGAGTCGGATGCCACTTGGACCTCATATGTAA 2148 0.4576 MAGIDDNVPLTSEWGHPSPSPRTFFSKMLGEDNLTRQISDHPGSGRTEEPFLQQNQELIMTGNFNTRDTALQDDASGGQLSDTNSLSENKSSSRGNLVERMAARAGFNAPRLNTESIRSADPTIYSDTRSAYFTIPPGLSPTTLLESPVFLSNSLAQPSPTTGKFPFISNGNFRGSEMNSGAPEKTKDNNFDDIYASTFAFRTTTTDLGSFYNVAARKMNPTMLPAQYLAAEVSASDMTDPPTQNDSRASVEEPADEEGGQRGHGDSQAAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHTNCTVKKKVERSHEGHITEIIYKGNHNHPKPPTNRRSAIGSVNPISDMQADATESTELHGGGDGELGWASTKKGNMARNGDGKHENLEVTSSAVSVGGPEFGNQSSNLASQNGTQFESGDAVDASSTFSNDEDDDDRATHGSVSVGYDGEGDESESKRRKLESYPNTAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNVGCTVRKHVERASHDLKSVITTYEGKHYHDVPAARNSNQGNAAASSAATGQASSVIQSHRAEASQVHNSIGRLDRPVLGLGSFNFPGSGPRPRPVRPQLGPSPGSSFGIGMNQSGFPNLATMAALGPAHKLPVMPVHSFLPNQRPPNMGFMWPKGEPNLEPIPDRGLNMPAGSSVYQDIMSRMPLGPHM 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1642 715 MobiDBLite consensus disorder prediction 359 472 - -
Lele25g1642 715 SMART WRKY_cls 277 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 SMART WRKY_cls 498 557 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 Gene3D WRKY domain 270 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 MobiDBLite consensus disorder prediction 68 96 - -
Lele25g1642 715 MobiDBLite consensus disorder prediction 455 469 - -
Lele25g1642 715 FunFam WRKY transcription factor 33 485 551 - -
Lele25g1642 715 SUPERFAMILY WRKY DNA-binding domain 275 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 MobiDBLite consensus disorder prediction 235 283 - -
Lele25g1642 715 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 145 578 IPR044810 GO:0003700
Lele25g1642 715 ProSiteProfiles WRKY domain profile. 493 558 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 FunFam WRKY transcription factor 267 337 - -
Lele25g1642 715 Pfam WRKY DNA -binding domain 278 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 Pfam WRKY DNA -binding domain 499 555 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 SUPERFAMILY WRKY DNA-binding domain 490 558 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 Gene3D WRKY domain 485 551 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 MobiDBLite consensus disorder prediction 557 630 - -
Lele25g1642 715 MobiDBLite consensus disorder prediction 68 97 - -
Lele25g1642 715 MobiDBLite consensus disorder prediction 560 591 - -
Lele25g1642 715 MobiDBLite consensus disorder prediction 391 431 - -
Lele25g1642 715 ProSiteProfiles WRKY domain profile. 278 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1642 715 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1642 Lele-ChrLele25 21999419 22003187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1642 1 710 WRKY Transcription Factor Family AT5G56270 48.059 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele25g1642 WRKY 1e-22 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1642 25 21999419 22003187 Lele27g0476 27 5970682 5974407 hybridization