Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1627 ATGAAAATTCAATTTTTTGTAAAAAGTTCCACCTTGAAGAATCTGGTTGGAGGCAGTGCAACTTCTGCCAAAAGGTCAGCAGATAAGTTTTTTGTTTATCTCTTGCGTAGTTTCTTTCTTCTTTTGTTTTCAATTCAAATTCTGTTCAAGCCTCCTCTTTTACTAGCTAGATATCAAAACATTTATGAATTGATTTGGCAGCCTATTCACTGCGGATGCATAGTATCTAAATCTTTGTTCGAGTACCTTGATTTTTGCGGAATAGCCTGTATTAGCTGTGTAAAGTCTCCCCAATTTCATTTGATGCAAAATAGTGAAATTTCTAATGGGTCTATTTCATCAACCAAAAATGTTGCAAGTGACCGACATTCTTCTCATATTGATGGTAGAATCTCTGTGGATAATGTTCATGAAGGGAAACTCATGCAACTGTGCAAAATTGTTGAGGCCAGAGAATCTAGCCACTGGTCTCCAGTTCAGAGAGATGGGATACTTTTATCTACTGGCCAGAACAGCCAGGAAGTTAAGCATCTGGCTAGGGAAGTGGACCCAGGATTTTCAAATGTGATGAGTCCATCTGTTCAGTCATTAACATTTTCAAAACTAGAAAATAGCAGACTGGCATGGGAGCTGAAAAATATACCTGAATTGCCTATACAACCATCATTGTGTATGTCTCTGAGAACTCCATCACAAAACTCTGTCCTGCCTTCTGCTGGAGAGATTGTAGAAGGAAGAAGTGAGGAAAAGCCATCTCCCTTTCATCAAGGGCAAAGGTCTAGGCCTATATTGCCCAAACCACCAAAGACTGGACTAACCATAAATCAAGAAACAAATAAAGGCGTGCTTTCTCATTCACGAATAGCCCGGCCACCTGCTGAGGCAAGGGGCAAGAATCAGTTGCTTCCTCGATACTGGCCCAGGATCACTGATAAAGAGCTGGAGCAATTGTCTGGAGAGTTATTTCAAAGTTTAAAATCAAGTGTAGTGCCACTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGCCGTCTTGTTCTTCCAAAAGCATGTGCTGAAGCTTATTTTCCTCCCATTTCTCAATCAGAAGGTCTTCCTTTGCGGATCCAAGATGTGAGGGGGAACGAGTGGACATTTCAGTTTCGGTTTTGGCCTAATAACAACAGTAGGATGTATGTGTTAGAGGGTGTGACTCCTTGCATACAGTCCATGCAATTACGTGCTGGTGATACTGTAATATTTAGTCGGATAGATCCTGGGGGCAAACTTGTTATCGGTTTCAGGAAGGCATCCAATTCTGTAGATACACAGGATGCCTCTACATCCTCACCTTCAAATGGCATTTCAATGAAGGATGCTTCTTTTTCTGAGGTCACTGATAATCTTCACTCAGGAAACAGTTATCCTCTTCCTCTCCAGTCAATGAAGAGGAACAGGGAAGCTTACTCAAATGGACTTTCAGAACATCTACCTTTGAATAGTATGGGTGATGGTTTGCCTAAGAGACAAGATCAATGGGCTCAATGTGATGATTGCTGTAAATGGCGAAGGCTGCCAATAGATGTTCTACTTCCTCCTAAGTGGACATGCTCAGAAAATGAGTGGGATGATAGCAGGTCTCTATGTTCGGCACTAGAGGAGATCAGTCCAAAGGAGTTGGAAAATCTTCTGAGAATTAGCAAAGGTTTTAAGAAGAGAAGAATTGCAGAAGACAAGAAGTCACCCCAAGAGCATGGAACTTCCGGCTTAGATGCTCTTGCCACAGTGGCAGTTTTAGGAGATAATTTTCTTGACCCTGCTGAGTCATCTGCCGGAATCACCACGAAACATCCTCGACACCGTCCAGGATGCACCTGCATAGTGTGCATCCAGCCACCAAGTGGGAAGGGGAGACACAAACCGACATGTACTTGCAACGTGTGCATGACTGTGAAACGCCGTTTCAAAACCCTTATGATGCGTAAAAAGAAACGCCAATCAGAACGTGAAGCAGATGCCATTACCGAGAAGGAACAAGGCCACCTGAAGGATGAATCCGAAACGAATGGCGCTTCAAGAGACGATGACACGGTTTGCATAGAAAAAGAGGGAGGCTTAGTCAGCAGTCATCCTGAGGTCAGTGAACCCAGTAATGGACAAATAGATCTGAATTGTCATCCCAAACGTGAAGACATGCTAGTTGATGCAACAGAACTGAGCATGACAAGTAGTCATCTTGAAACAACTAACTATCTACCATAA 2250 0.428 MKIQFFVKSSTLKNLVGGSATSAKRSADKFFVYLLRSFFLLLFSIQILFKPPLLLARYQNIYELIWQPIHCGCIVSKSLFEYLDFCGIACISCVKSPQFHLMQNSEISNGSISSTKNVASDRHSSHIDGRISVDNVHEGKLMQLCKIVEARESSHWSPVQRDGILLSTGQNSQEVKHLAREVDPGFSNVMSPSVQSLTFSKLENSRLAWELKNIPELPIQPSLCMSLRTPSQNSVLPSAGEIVEGRSEEKPSPFHQGQRSRPILPKPPKTGLTINQETNKGVLSHSRIARPPAEARGKNQLLPRYWPRITDKELEQLSGELFQSLKSSVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVRGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVIFSRIDPGGKLVIGFRKASNSVDTQDASTSSPSNGISMKDASFSEVTDNLHSGNSYPLPLQSMKRNREAYSNGLSEHLPLNSMGDGLPKRQDQWAQCDDCCKWRRLPIDVLLPPKWTCSENEWDDSRSLCSALEEISPKELENLLRISKGFKKRRIAEDKKSPQEHGTSGLDALATVAVLGDNFLDPAESSAGITTKHPRHRPGCTCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREADAITEKEQGHLKDESETNGASRDDDTVCIEKEGGLVSSHPEVSEPSNGQIDLNCHPKREDMLVDATELSMTSSHLETTNYLP 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1627 749 MobiDBLite consensus disorder prediction 659 697 - -
Lele25g1627 749 Pfam B3 DNA binding domain 333 433 IPR003340 GO:0003677
Lele25g1627 749 ProSiteProfiles B3 DNA-binding domain profile. 333 434 IPR003340 GO:0003677
Lele25g1627 749 FunFam B3 domain-containing transcription repressor VAL1 307 438 - -
Lele25g1627 749 Pfam CW-type Zinc Finger 508 551 IPR011124 GO:0008270
Lele25g1627 749 SUPERFAMILY DNA-binding pseudobarrel domain 330 433 IPR015300 -
Lele25g1627 749 Gene3D - 307 438 IPR015300 -
Lele25g1627 749 CDD B3_DNA 331 432 IPR003340 GO:0003677
Lele25g1627 749 Gene3D - 506 562 - -
Lele25g1627 749 SMART B3_2 333 434 IPR003340 GO:0003677
Lele25g1627 749 MobiDBLite consensus disorder prediction 655 724 - -
Lele25g1627 749 MobiDBLite consensus disorder prediction 246 274 - -
Lele25g1627 749 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 68 460 - -
Lele25g1627 749 ProSiteProfiles Zinc finger CW-type profile. 503 553 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1627 Lele-ChrLele25 21491693 21504385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1627 506 699 B3 DNA Binding Superfamily AT2G30470 53.302 2.38e-61 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele25g1627 B3 4.2e-16 CL0405