Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1626 ATGACTTCAAGTAACCGATGCCACTATGAAGTCCTTGGCCTCCAGCGAGACTGTACTCCTGATGAAATACGGTCAGCATATAGGCGCCTCGCCCTTCAGCGCCACCCTGACAAGCTTGTCAAATCTGGCTTATCACAAGCTGAAGCCACAGCTCAATTCCAGGAGCTCCAACATGCCTATGAAGTCCTTTCTGACCCCAAAGAGCGTGCATGGTATGATTCCCACCGGTCTCAGATTCTATTTTCTGATCCCAACTCAGTTGGAAACTCAGCCCCCAACTCGTTCATCCCGAACCTGTTTTCCTTCTTCTCTATGAATGCTTATTCTGGATATTCGGACACTGGCAAGGGATTCTACAAGGTTTATTCTGATGTTTTTGATAAAATTCATGCCAATGAAATTAACTTTGCTAGGACATTAGGACTAGGTATTGATGTGGTTCGACAAGCCCCAGTAATGGGCAATTTGGATAGCCCTTATGCTCAAGTGACAGCATTTTACAATTACTGGTTGGGATTTTCAACAGTTATGGATTTTTGTTGGGTGGATGAGTATAATGTTATGGCTGGTCCTAACCGGAAGTCAAGGCGTCTTATGGAGGAAGAGAACAGCAAGATCAGAAAGAAGGCAAAGAAAGAGTACAATGACACAGTGCGGAAGTTGGCTGAGTTTGTCAAGAAGAGGGATAAAAGGGTGATTGATATGAAGATGAAGAAGAATATGGAGATGGAAAAGATGAAAGAGGAGGAGAGGGAGAGGAAGAGGCAGTTGGAGAAGGAGAAAAAGGAGCGAGCAATGTCATATGAAGAGCCTGAATGGGCCAAAGTGGAGGAGGATGAAGAAGATGAGGCTGATTGGTTTGAGGAGGGGAGTAAGAAGAAGAATGCTGAGAATGAGTTTTATTGTGTACTGTGTAGCAAGAAGTTCAAGAGTGAGAAGCAATGGAAGAACCATGAGCAATCAAAGAAGCATAAGGAGAAAGTTGTGGAATTTAGGGATTCACTTGATGATGAAGAGAATGCAGAAGTAGAGGTGGAAGAAAGAAAAGGAAAGGCGAGCTCAGAAAGTTACGAAGACAAAATTGGGGTGAATGAGGATATATCTGGGAGCACTGATAATGAGATTGATGATTTAGAAGGGAGAATTAGAGATGATCTTAATGTTGCAGAGGAGGCAACAAGAAACGGGGCTGAGTTGAATGAAGAAGAGGAAGAAGAATTTCTTGATGCCTGGCATCCAGAAGGGGATTTTGATGTAGAAAAACATGATGATGAATTTGGTGTCCTTGAAGCAATGCTGGCTGGGCACAGGAGCAGAAAAACTGGTGCCCCAAGCCAGGAGCGCAAGGATTCGGTGCGTACATCTCAAAATGATACTGAGAGTGATGAGGTTGGTTTTATGGAATATGACAACCGAAAGAATTCTAGAAAGAAACGTGGAACTAAAAAAGAGAAAGGAAGAAAAAATAATGAAGAATTGAAGGTGACTAGGAACAGTGATTTTCAGAATGAAGAAAGCATTAACGGTGATGCATCTCAGGCAGAAGACTCTTCTTCATATAATGTGGAAAACGAGAATAATGGTACAGAAAATGAGCAGATCGGTAGAGATAAGAAGACTTCGAATCAACGTATTAATAAAAAAGGAGCTGCAAAGGACACAATAACCAATGGAAAAAATTCCTCCAAAACAAGAAAAGCCAAGCCTTCCATGATTCTTTATACTTCCATTTTTGTGGTTATTGTTATATGGTTTCTGGGATTTACAGGTACATCAAAGAATCTTGGCAATTTCTGTGAGGCTTGCGGTGAGGAGTTTGATTCAAGGAACAAATTGCATAAACATCTGGGGGAAACGGGGCATGCTACAATAAAACCCACAAGGAAGCATCACTAG 1896 0.4204 MTSSNRCHYEVLGLQRDCTPDEIRSAYRRLALQRHPDKLVKSGLSQAEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSVGNSAPNSFIPNLFSFFSMNAYSGYSDTGKGFYKVYSDVFDKIHANEINFARTLGLGIDVVRQAPVMGNLDSPYAQVTAFYNYWLGFSTVMDFCWVDEYNVMAGPNRKSRRLMEEENSKIRKKAKKEYNDTVRKLAEFVKKRDKRVIDMKMKKNMEMEKMKEEERERKRQLEKEKKERAMSYEEPEWAKVEEDEEDEADWFEEGSKKKNAENEFYCVLCSKKFKSEKQWKNHEQSKKHKEKVVEFRDSLDDEENAEVEVEERKGKASSESYEDKIGVNEDISGSTDNEIDDLEGRIRDDLNVAEEATRNGAELNEEEEEEFLDAWHPEGDFDVEKHDDEFGVLEAMLAGHRSRKTGAPSQERKDSVRTSQNDTESDEVGFMEYDNRKNSRKKRGTKKEKGRKNNEELKVTRNSDFQNEESINGDASQAEDSSSYNVENENNGTENEQIGRDKKTSNQRINKKGAAKDTITNGKNSSKTRKAKPSMILYTSIFVVIVIWFLGFTGTSKNLGNFCEACGEEFDSRNKLHKHLGETGHATIKPTRKHH 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1626 631 MobiDBLite consensus disorder prediction 547 566 - -
Lele25g1626 631 MobiDBLite consensus disorder prediction 530 546 - -
Lele25g1626 631 Pfam DnaJ domain 8 73 IPR001623 -
Lele25g1626 631 Pfam Zinc-finger double-stranded RNA-binding 300 325 IPR022755 -
Lele25g1626 631 CDD DnaJ 7 65 IPR001623 -
Lele25g1626 631 PRINTS DnaJ domain signature 27 42 IPR001623 -
Lele25g1626 631 PRINTS DnaJ domain signature 9 27 IPR001623 -
Lele25g1626 631 PRINTS DnaJ domain signature 48 68 IPR001623 -
Lele25g1626 631 SUPERFAMILY beta-beta-alpha zinc fingers 294 342 IPR036236 -
Lele25g1626 631 SMART dnaj_3 6 68 IPR001623 -
Lele25g1626 631 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Lele25g1626 631 MobiDBLite consensus disorder prediction 412 430 - -
Lele25g1626 631 MobiDBLite consensus disorder prediction 243 272 - -
Lele25g1626 631 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 2 625 IPR044648 -
Lele25g1626 631 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Lele25g1626 631 SMART ZnF_U1_5 297 331 IPR003604 GO:0003676|GO:0008270
Lele25g1626 631 MobiDBLite consensus disorder prediction 500 529 - -
Lele25g1626 631 MobiDBLite consensus disorder prediction 441 457 - -
Lele25g1626 631 Coils Coil 233 267 - -
Lele25g1626 631 Gene3D Classic Zinc Finger 288 352 - -
Lele25g1626 631 MobiDBLite consensus disorder prediction 323 566 - -
Lele25g1626 631 ProSitePatterns Zinc finger C2H2 type domain signature. 599 621 IPR013087 -
Lele25g1626 631 MobiDBLite consensus disorder prediction 485 499 - -
Lele25g1626 631 ProSiteProfiles Zinc finger C2H2 type domain profile. 597 626 IPR013087 -
Lele25g1626 631 Coils Coil 375 395 - -
Lele25g1626 631 SUPERFAMILY Chaperone J-domain 3 79 IPR036869 -
Lele25g1626 631 MobiDBLite consensus disorder prediction 344 362 - -
Lele25g1626 631 SMART c2h2final6 597 621 IPR013087 -
Lele25g1626 631 SMART c2h2final6 300 324 IPR013087 -
Lele25g1626 631 MobiDBLite consensus disorder prediction 243 275 - -
Lele25g1626 631 ProSitePatterns Zinc finger C2H2 type domain signature. 302 324 IPR013087 -
Lele25g1626 631 Gene3D DnaJ domain 1 87 IPR036869 -
Lele25g1626 631 MobiDBLite consensus disorder prediction 397 411 - -
Lele25g1626 631 MobiDBLite consensus disorder prediction 374 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1626 Lele-ChrLele25 21484447 21487037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1626 3 625 C2H2 Transcription Factor Family AT1G74250 50.000 1.10e-180 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele25g1626 DnaJ 6.8e-22 CL0392