Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1616 ATGGAGAATAAACCAAAAATATTAATGCAAAAGTATGAATTAGGAAGGTTATTAGGCCAAGGAACATTTGGAAAGGTATATTTTGCCCGCAGTACAATAACTAACCAAAGTGTAGCTATTAAAGTGATGGGCAAGGACAAAGTTTTGAAATCTGGACAAACTGAACAGATCAAGCGGGAAATATCTGTAATGCGACATGTCAAACATCCCAATGTTATACAGCTTTATGAGGTTATGGCCACCAAAAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGTGGTGAGCTCTTTGACAAGGTGGCCAAAGGAAAGCTTAGAGAAGATGTTGCCCATAAATTATTTCAGCAGCTGGTGAATGCCATAGACTTTTGTCATAGTAGAGGTGTTTACCACCGTGACATAAAGCCGGAGAACCTTTTGTTGGATGAAAATGGGAACCTAAAGGTCTCTGATTTCGGATTGAGTGCTCTAGCTGAATCCAAGAGACAGGATGGCTTACTACACACGCCTTGTGGCACGCCTGCCTATGTTGCTCCTGAAATCATCAGAAGGAAAGGTTATGATGGTGCCAAAGCTGATACTTGGTCTTGTGGAGTAGTTTTGTTTGTCTTACTGGCAGGTTATCATCCTTTCCATGATTCAAATTTGATAATGATGTATAGGAAGGTTTCCAAGGCAGACTATAAATTCCCTAGTTGGTTCTCCCCAGAAGTTCGTAGACTGTTAATGAAGGTTTTGGATCCAGATCCTAATACTAGAATTCCCCTAGCTAAGATTAAGGAATCTTATTGGTTTATGAAAGGGCCATCTTCTAGAGATAGGAAATCTGAATGTGTGAACAAGAGTGTCTCGACATCAGGTACAAAGTCATGTGATCAAACCGAAGAAAGTGATAGTATAGCAGAAGAAGCGACACAAGAGTTATTTGTGCCCACAAGTATAAATGCCTTTGACATCATCTGCCGTTCTAAAGGTTTTGATCTATCAGGATTCTTTGAAGATGGTTTCAAGAAGAGAGAAGCCAGATTTTCTTCAAGGCAAGCATACTCAGTCATTATCTCCAAGCTAGAAGAAATTGCCAAGCGTCTGAAGCTGAAAATAAAGAAACGAGGTGCAGGTTTGTTGAAATTAGAGGGCCTGAAGGAAGGTAGAAAAGGGATTCTTAGCATTGACGTGGAGATCTTTGAGGCTGCTCCATCTTTCCATTTGATTGAGATGAGAAAATCAAATGGAGACACTTTGGAATATCATAGCGTATTGAAAGAGGAAATTAGGCCTGCTCTTAAGGATATCGTTTGGGTTTGGCAAGGGGACGAGCAGCAACAATCACAACCATCAGAGGACCAGATTCAGATGCATGACCAGCTACAACCAGTGACAGCATCTACATCCATGTCACATTCTTAA 1410 0.4028 MENKPKILMQKYELGRLLGQGTFGKVYFARSTITNQSVAIKVMGKDKVLKSGQTEQIKREISVMRHVKHPNVIQLYEVMATKSKIYFVIEYAKGGELFDKVAKGKLREDVAHKLFQQLVNAIDFCHSRGVYHRDIKPENLLLDENGNLKVSDFGLSALAESKRQDGLLHTPCGTPAYVAPEIIRRKGYDGAKADTWSCGVVLFVLLAGYHPFHDSNLIMMYRKVSKADYKFPSWFSPEVRRLLMKVLDPDPNTRIPLAKIKESYWFMKGPSSRDRKSECVNKSVSTSGTKSCDQTEESDSIAEEATQELFVPTSINAFDIICRSKGFDLSGFFEDGFKKREARFSSRQAYSVIISKLEEIAKRLKLKIKKRGAGLLKLEGLKEGRKGILSIDVEIFEAAPSFHLIEMRKSNGDTLEYHSVLKEEIRPALKDIVWVWQGDEQQQSQPSEDQIQMHDQLQPVTASTSMSHS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1616 469 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 431 - -
Lele25g1616 469 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1616 469 Gene3D Phosphorylase Kinase; domain 1 6 98 - -
Lele25g1616 469 Gene3D Transferase(Phosphotransferase) domain 1 99 312 - -
Lele25g1616 469 CDD CIPK_C 316 430 - -
Lele25g1616 469 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1616 469 Gene3D Kinase associated domain 1, KA1 313 435 - -
Lele25g1616 469 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lele25g1616 469 FunFam Non-specific serine/threonine protein kinase 6 307 - -
Lele25g1616 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lele25g1616 469 Pfam NAF domain 312 370 IPR004041 GO:0007165
Lele25g1616 469 MobiDBLite consensus disorder prediction 270 298 - -
Lele25g1616 469 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lele25g1616 469 MobiDBLite consensus disorder prediction 281 295 - -
Lele25g1616 469 MobiDBLite consensus disorder prediction 444 469 - -
Lele25g1616 469 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1616 469 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Lele25g1616 469 SUPERFAMILY Protein kinase-like (PK-like) 8 296 IPR011009 -
Lele25g1616 469 FunFam Non-specific serine/threonine protein kinase 311 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1616 Lele-ChrLele25 21068614 21070023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1616 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 66.083 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele25g1616 Pkinase 3.3e-73 CL0016