Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1615 ATGAAGGTTGAGTTTGTGTCCAAACAAATCATAAAGCCATCTTCTCCAACACCCAAAAACCTTAGAACTTTTAAGCTTTCATTCATTGACCAGATTGCCCCTATATTTCACACTCGAATTCTATTTTTCTATCCCAATATCGAAAACAATGTTGTTGCTAATGATCAAGACAGGTTTGAGAGGCTGAAAACGTCATTGTCTGAGACTCTAACCCACTTCTATCCACTTGCGGGTAGAGTCAAAGACAACATAGTAATTGAATGTAACGATGAAGGTGTTGAGTTTTGCGAGGCTCGTGTTCATGGCTTCGTCTCCGACATCCTTAAACAACCCGATGCTGACTCTGTACACCAGTTTGTGCCTGTAGATGATGCTCATTTGGGAAGTGGGTTTTTAGTGAAAGTTCAAGTGAATTTGTTTGATTGTGGAAGTTTGGCTATGGGTGTATCTTTTTCTCACAAGATTGCTGATGCTTCAACAATTGGTTCATTCATTAAGGCTTGGTCTTGTTCAGCTGTTGGGTGCATGACTGAGTCGTTGCTTCCAAAGTATGTTTTGAGTTCTCTTTACCCTTCCATGGATTTTCCGATTGTTCTTCCTCCTCTTGAGTTCAGACACTTCAATTGTATCACAAGAAGGTACGTGTTTGATTCCTCAAAGATAACAAAACTGAAGGCTGAAGCATCAAGCAAGATAGTGGAGAATCCAACAAGAGTGGAGGCAGTATTTGCCCTAATTTGGAAGTGTGCCACAACAGCATCAAGGTCAAACCTAGGAATAACCAAAAGACCCTCCATGGCATCCCAAATAGTAAACATTCGTAAAAGAACAAGCCCACCATTACCTGAGACCAGTATAGGAAACTTTATAGGTCACTTTATAGCAAAACCAGAAGAATCGTCTAATGAGAGTGGTGAAATGAACTTACAAGGGCTAGTAATTCATCTAAGGAAAGGTCTACAACAATTCTCAAAGGAACATGTCCAAAAACTTCAACAAGAAAATGCTTTCATGACGGTGTGTGAGGGATTGAAGGACATGGAACTGGTTTACAATGAAGGTGTTGATTTCTATGGTTGTACAAGTTGGTGTCGTTTTGAGTTTTATGAAGCAGATTTTGGGTGGGGAAAACCCAAGTGGGTAAGTATTCCTTCTTTGAAAATAAAGAATTCAATTATTCTGATGGATACAAGTGATGGAAAAGGAACAGAAGCTTGGGTTACTTTGAGTGAACAAGATATGGCCTTGATGGAGAGAAACCAAGAATTGCTTGAATTTGCGTCCTTGAATCCAACTATAATATAA 1305 0.3946 MKVEFVSKQIIKPSSPTPKNLRTFKLSFIDQIAPIFHTRILFFYPNIENNVVANDQDRFERLKTSLSETLTHFYPLAGRVKDNIVIECNDEGVEFCEARVHGFVSDILKQPDADSVHQFVPVDDAHLGSGFLVKVQVNLFDCGSLAMGVSFSHKIADASTIGSFIKAWSCSAVGCMTESLLPKYVLSSLYPSMDFPIVLPPLEFRHFNCITRRYVFDSSKITKLKAEASSKIVENPTRVEAVFALIWKCATTASRSNLGITKRPSMASQIVNIRKRTSPPLPETSIGNFIGHFIAKPEESSNESGEMNLQGLVIHLRKGLQQFSKEHVQKLQQENAFMTVCEGLKDMELVYNEGVDFYGCTSWCRFEFYEADFGWGKPKWVSIPSLKIKNSIILMDTSDGKGTEAWVTLSEQDMALMERNQELLEFASLNPTII 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1615 434 Coils Coil 434 434 - -
Lele25g1615 434 Pfam Transferase family 1 423 - -
Lele25g1615 434 Gene3D - 207 427 IPR023213 -
Lele25g1615 434 Gene3D - 1 196 IPR023213 -
Lele25g1615 434 PANTHER F21J9.9 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1615 Lele-ChrLele25 20838433 20840394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1615 1 419 Monolignol Biosynthesis Gene Families AT5G48930 23.956 6.26e-25 104