Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1613 ATGGCGATGACACGGCACCGTTCCAGTACCTATAGATTTTTGCTGTCCTCTCTCTTTGGAATTGATGAAAGATCTCTTGATTGTGTCATCGGGCAAACTTACGAGCGAGCTTTCATTAAGAACTGGATCGATCTTGGGCTTACTATATGTCCGAAGATGCGTCAGACTTTGGCTCATACCATCCTAATACCAAATTATACTGTAAAGGCACTGATTGCAAATTGGTGTGAATTGAACAATGTCAAGCTAGTTGATGATCCTTTAATAGTGTCCTCAAACTTGAATCATCATTGCACTTCAGAAGGTTCTTCAAGTGATAACATGGCTTGTAGCCAAAGTTTGGATATTTTAAGAATGTCACAAACAAGTTATGATGATAACATGTCTCTAGCTAGCTCAGATAGCCAAGATTTCATCAGAGATTCTTCTATGGAGGTTAATCCAAGGTCAGATATAGCTAGTGATTCTACCTTAAAAGCTAGGAGAGACTCTGAATTTTTGCCTCCATTGTTAGAGGCAAGGTTTCAAATCTTAAGTATATGGAAGCAGCCATCAAAGAATTTAAGGTTAACATCTTCACCTGTTAGTAGTCCTTATGGTATTGAAACACGGGTTCAGAATTTGGCTAAAGAGTTGAAGAGCTCTTCAATGGAACTTAGAGAGAAGTAA 669 0.3857 MAMTRHRSSTYRFLLSSLFGIDERSLDCVIGQTYERAFIKNWIDLGLTICPKMRQTLAHTILIPNYTVKALIANWCELNNVKLVDDPLIVSSNLNHHCTSEGSSSDNMACSQSLDILRMSQTSYDDNMSLASSDSQDFIRDSSMEVNPRSDIASDSTLKARRDSEFLPPLLEARFQILSIWKQPSKNLRLTSSPVSSPYGIETRVQNLAKELKSSSMELREK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1613 222 PANTHER U BOX DOMAIN-CONTAINING 26 217 - -
Lele25g1613 222 Pfam U-box domain 31 79 IPR003613 GO:0004842|GO:0016567
Lele25g1613 222 ProSiteProfiles U-box domain profile. 31 82 IPR003613 GO:0004842|GO:0016567
Lele25g1613 222 SMART Ubox_2 25 75 IPR003613 GO:0004842|GO:0016567
Lele25g1613 222 SUPERFAMILY RING/U-box 31 83 - -
Lele25g1613 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 84 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1613 Lele-ChrLele25 20774266 20776099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1613 31 85 U-box Gene Family AT2G23140 81.818 7.66e-28 108