Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1582 ATGGAGCTTTGCAGCTTAAGCTTTCGAACTATCCTCCATTCCAACTCATCTCCACCTCGTCTCTCTTCCTTTTCTTCTACTTCTTTTTCTCTTCAAAATTCTTCATTCCAGTGTAAGCCTAAAGCCTTCAATTCTCTAAAGCATTCATCTCACACCCCCCAAATTCAACTCTTCCAGCTCAGCTTACATCTTCAGAACTCGTGTCTCCATACAGTTTCAGCTTCTCCTTCTTCCTCTTCCGTCACTGCTGACACTGAAATAGACCGGCTTCCTGCGGATTTGAATGTCACCGAAACTCAAGAACCCAATTCCAGAGTTAAACTGCAGGTCGAAGTTCCTCCTTTGGTATGTGAGGATTGTTACAAAATGGTCATAGCTGAGTTTACTAAACAGGCAAAGGTCCCTGGCTTTCGCCCTGGAAAAGTTCCTGAGAGTATTCTTGTAAATTTTGTTGGAAAGAAAAATGTTCAAAAGGCTGCAGTTGAATCAATTTTGAGGAGGACGCTTTCACATGCCATGTTGAAGGTTACTGGAAAGGCTTTGCAGGACTCAATACGTATAGTGACTAAATTTTCTGAGTTGGAGGAGGCATATTCTTCTCGTGGGTCTCTAAGATATGAGGTCATAGTTGATGTTGTACCTGAAATAAAATGGGTAACTGAGAATGCATATAAAAATATGAAGATAGTTGTTGAAATAGACAGTGATATAGATGCTCACAAAGCATCTGAACAAGAATTAAGAAGACGTCACAAGTCCATCGGTCCAATGAAAATTGTTACTAAGAGAGGGCTACAGATTGGCGATGTTACTGTCCTTGATATCTCTGCAACAACAATTGATCAGGATGAATCAAAAATTAAAAATATTCCATCTGCTGAAAGTAAAGGGTTTCATTTTGACACGGATGATGGTGACAAAGTACTACCTGGTTTCGTTGATTCTATTATTGGGATTCGTACAGGTGAAACAAAGTCATTTCCTCTAGTATTTCCTGAATCATGGAAGCAAGAAAATCTCCGTGGCGTTCATGCTCAATTTACTGTTACTTGCAAAGAACATTTTTACAGAGATTTACCTGAGTTAAATGATTCTATTGCTGATAAGCTTCTTCCTGGATGCACCACAGTGGAGCAGGTCAAAGAAATATTGTTACAGAGATTTCTTGAGGTGGAGCAGACAGCCCGAGAACAAGCAACTGATAATGCTATCTTAGATCAGCTTTCTAAGATGGTAGAGGTTGATATCCCTCAATCCTTGTTTGAGGAACAAGGTAGACAACTTTATGGAGCCAGCTTATTAGAAATTCAGGCAAAAGTAAAACTAACTGAGCAGCAGTTGGCTTCGCTGTCAAGTCCAAAGGCTGTGAGTGAATATCTCGAACACCAAAGAGATAATATAACAAGGTTGATAAAACAGAATCTGGCAGTTGGAGATATATATAAGCGTGAGAATTTGGAGTTTGCTACCGAGGATCTTGTCAAAGAGGTTGAAAATTCCATAGCTGAATTTAAGCGTCAAAAGCAAGAATATGATGAAGAACGGGTGAAGGACCAGGTGCAAGAGATACTAGAAGGAGCTAAGGTGCTTGAATGGGTGAAAGAACATGCAGAGATTCAGTACATAATCCGATGA 1635 0.3994 MELCSLSFRTILHSNSSPPRLSSFSSTSFSLQNSSFQCKPKAFNSLKHSSHTPQIQLFQLSLHLQNSCLHTVSASPSSSSVTADTEIDRLPADLNVTETQEPNSRVKLQVEVPPLVCEDCYKMVIAEFTKQAKVPGFRPGKVPESILVNFVGKKNVQKAAVESILRRTLSHAMLKVTGKALQDSIRIVTKFSELEEAYSSRGSLRYEVIVDVVPEIKWVTENAYKNMKIVVEIDSDIDAHKASEQELRRRHKSIGPMKIVTKRGLQIGDVTVLDISATTIDQDESKIKNIPSAESKGFHFDTDDGDKVLPGFVDSIIGIRTGETKSFPLVFPESWKQENLRGVHAQFTVTCKEHFYRDLPELNDSIADKLLPGCTTVEQVKEILLQRFLEVEQTAREQATDNAILDQLSKMVEVDIPQSLFEEQGRQLYGASLLEIQAKVKLTEQQLASLSSPKAVSEYLEHQRDNITRLIKQNLAVGDIYKRENLEFATEDLVKEVENSIAEFKRQKQEYDEERVKDQVQEILEGAKVLEWVKEHAEIQYIIR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1582 544 SUPERFAMILY FKBP-like 263 363 - -
Lele25g1582 544 Pfam Bacterial trigger factor protein (TF) C-terminus 376 535 IPR008880 GO:0006457|GO:0015031
Lele25g1582 544 Pfam Bacterial trigger factor protein (TF) 95 233 IPR008881 GO:0006457|GO:0015031
Lele25g1582 544 Gene3D - 253 360 IPR046357 GO:0003755
Lele25g1582 544 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 362 540 IPR027304 -
Lele25g1582 544 FunFam Trigger factor 258 360 - -
Lele25g1582 544 SUPERFAMILY Trigger factor ribosome-binding domain 94 231 IPR036611 GO:0006457|GO:0015031
Lele25g1582 544 Hamap Trigger factor [tig]. 94 540 IPR005215 GO:0015031
Lele25g1582 544 FunFam Chloroplast trigger factor 341 539 - -
Lele25g1582 544 FunFam Trigger factor 94 216 - -
Lele25g1582 544 Gene3D - 224 539 IPR037041 GO:0006457|GO:0015031
Lele25g1582 544 Coils Coil 494 514 - -
Lele25g1582 544 TIGRFAM tig: trigger factor 105 533 IPR005215 GO:0015031
Lele25g1582 544 Gene3D - 92 216 IPR036611 GO:0006457|GO:0015031
Lele25g1582 544 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 28 526 IPR005215 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1582 Lele-ChrLele25 15157438 15167122 Dispersed/Wgd