Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1571 ATGGACACTATCGCGAGTTTAGATCTTGCGACTAACAATTCCAGCTGCAACAGATCATCGACTGCGGATGATGGAGCATCAGACTCCATGGAAGATAACAAGAGAAAAGAGTATGCAGCTTTGTTAGCTGAATTGCAGCATATGAAAGCTGAAAATCAACGTATGAGAGATTTGCTTGATCAGGTGAACTTAAACTACAATACCCTGCAATTACGACTTATCAAGCTCAAGCAGACGCACACTAATGAGGTAGAAGAAGCTGCAGGCAGTGGAGATCATCACATTGAGAGGAAAGGAGGAATGATGATAGGGCCATTATTAGTTGAAGATAATAATAAAAGTAGTGAAGGCAAATTGATGATTAGAGAAAACAAAAGCCACAACAATATGCTTGATTTGAAGGAATGCGTCAAGATTGAGAAGAGCACAGACAGTAGTGACCATCATCATCATGCAAAAGCCACTTCATCAGATACCATATCACTCGTAAAGAAAGATCGGGTATCAGTTCGAGCACGTTCAGAGACTCCAACGATATCAGATGGATGCCAGTGGAGGAAGTATGGGCAAAAGATGGCAAAAGGAAACCCTTGCCCACGAGCTTATTATCGTTGCTCTATGGGAATTTGTTGTCCGGTACGAAAACAAGTACAGAAGTGTGCCGAAGATAGAAGCATTCTGATAACTACATACGAAGGACAACACAATCATCCACTTCCTCCAGCAGCCAAAACTATGGCTTCCACAACATCTTCGGCTGCTTCAATGCTTCTTTCAGGATCAATTCAAAGTTCAGATCATCATCTTCTAAATAACCTCATAAGTCCTAATCTTTTAGAAGGTGCTTCAATACTTGGTTCCTCACACAACATAGCTACTCTCACTGCCTCAGCTCCATTCCCCACCATAACTTTGGACCTTACTCGTCATCAAACCACGCCGCTGAATATTTTCGGTCAGGCTCTGGGTGATCAACACTCTAGGGTTTCTCAGGGAACGACATCTTCATTCAATGATACGGTGAATGCAGCCACGGCTGCTATTACAGCAGATCCCAATTTCACTGCAGCTCTTGTGGCTGCCGTTACTTCTATCATTGGAAGTTCCCAATCCAACAATAATAGTGGTTCTGATATTACTGCAAGTGGAAAACCCTAG 1158 0.4266 MDTIASLDLATNNSSCNRSSTADDGASDSMEDNKRKEYAALLAELQHMKAENQRMRDLLDQVNLNYNTLQLRLIKLKQTHTNEVEEAAGSGDHHIERKGGMMIGPLLVEDNNKSSEGKLMIRENKSHNNMLDLKECVKIEKSTDSSDHHHHAKATSSDTISLVKKDRVSVRARSETPTISDGCQWRKYGQKMAKGNPCPRAYYRCSMGICCPVRKQVQKCAEDRSILITTYEGQHNHPLPPAAKTMASTTSSAASMLLSGSIQSSDHHLLNNLISPNLLEGASILGSSHNIATLTASAPFPTITLDLTRHQTTPLNIFGQALGDQHSRVSQGTTSSFNDTVNAATAAITADPNFTAALVAAVTSIIGSSQSNNNSGSDITASGKP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1571 385 Gene3D WRKY domain 164 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1571 385 MobiDBLite consensus disorder prediction 1 24 - -
Lele25g1571 385 SUPERFAMILY WRKY DNA-binding domain 172 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1571 385 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 375 IPR044810 GO:0003700
Lele25g1571 385 SMART WRKY_cls 179 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1571 385 Pfam WRKY DNA -binding domain 181 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1571 385 MobiDBLite consensus disorder prediction 1 32 - -
Lele25g1571 385 Coils Coil 31 79 - -
Lele25g1571 385 MobiDBLite consensus disorder prediction 142 161 - -
Lele25g1571 385 FunFam probable WRKY transcription factor 31 164 241 - -
Lele25g1571 385 ProSiteProfiles WRKY domain profile. 174 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1571 Lele-ChrLele25 13045873 13051731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1571 23 366 WRKY Transcription Factor Family AT4G04450 42.891 3.29e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele25g1571 WRKY 2.5e-22 CL0274